Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
CIITAP33076 RNA5SP321-201ENST00000362722 111 ntBASIC7.64□□□□□ -1.19
CIITAP33076 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC7.64□□□□□ -1.19
CIITAP33076 AL589794.1-201ENST00000424971 390 ntBASIC7.64□□□□□ -1.19
CIITAP33076 PFN1P11-201ENST00000445829 389 ntBASIC7.64□□□□□ -1.19
CIITAP33076 LAPTM4BP1-201ENST00000447781 690 ntBASIC7.64□□□□□ -1.19
CIITAP33076 PPIAP32-201ENST00000449940 472 ntBASIC7.64□□□□□ -1.19
CIITAP33076 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC7.64□□□□□ -1.19
CIITAP33076 RPL7AP23-201ENST00000482625 776 ntBASIC7.64□□□□□ -1.19
CIITAP33076 AC091917.2-201ENST00000505002 744 ntBASIC7.64□□□□□ -1.19
CIITAP33076 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC7.64□□□□□ -1.19
CIITAP33076 AC091849.1-201ENST00000509920 121 ntBASIC7.64□□□□□ -1.19
CIITAP33076 AC106800.2-201ENST00000514009 1103 ntBASIC7.64□□□□□ -1.19
CIITAP33076 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC7.64□□□□□ -1.19
CIITAP33076 AC084851.2-201ENST00000530377 364 ntBASIC7.64□□□□□ -1.19
CIITAP33076 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC7.64□□□□□ -1.19
CIITAP33076 RAB30-209ENST00000532548 644 ntTSL 3 BASIC7.64□□□□□ -1.19
CIITAP33076 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC7.64□□□□□ -1.19
CIITAP33076 HMGN1P26-201ENST00000558737 303 ntBASIC7.64□□□□□ -1.19
CIITAP33076 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC7.64□□□□□ -1.19
CIITAP33076 AC004232.1-201ENST00000571388 208 ntBASIC7.64□□□□□ -1.19
CIITAP33076 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC7.64□□□□□ -1.19
CIITAP33076 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC7.64□□□□□ -1.19
CIITAP33076 AP000577.1-201ENST00000624366 878 ntBASIC7.64□□□□□ -1.19
CIITAP33076 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC7.64□□□□□ -1.19
CIITAP33076 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CIITAP33076 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CIITAP33076 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CIITAP33076 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
CIITAP33076 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CIITAP33076 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CIITAP33076 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
CIITAP33076 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
CIITAP33076 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.64□□□□□ -1.19
CIITAP33076 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.64□□□□□ -1.19
CIITAP33076 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC7.63□□□□□ -1.19
CIITAP33076 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
CIITAP33076 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CIITAP33076 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC7.63□□□□□ -1.19
CIITAP33076 NBPF8-201ENST00000583271 5330 ntBASIC7.63□□□□□ -1.19
CIITAP33076 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
CIITAP33076 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
CIITAP33076 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.63□□□□□ -1.19
CIITAP33076 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.63□□□□□ -1.19
CIITAP33076 RNA5SP65-201ENST00000363166 119 ntBASIC7.63□□□□□ -1.19
CIITAP33076 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
CIITAP33076 MIR1266-201ENST00000408125 84 ntBASIC7.63□□□□□ -1.19
CIITAP33076 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC7.63□□□□□ -1.19
CIITAP33076 GAPDHP16-201ENST00000448152 962 ntBASIC7.63□□□□□ -1.19
CIITAP33076 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC7.63□□□□□ -1.19
CIITAP33076 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC7.63□□□□□ -1.19
CIITAP33076 AC117395.1-201ENST00000487390 403 ntBASIC7.63□□□□□ -1.19
CIITAP33076 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.63□□□□□ -1.19
CIITAP33076 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
CIITAP33076 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CIITAP33076 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC7.63□□□□□ -1.19
CIITAP33076 ANP32BP1-202ENST00000568553 737 ntBASIC7.63□□□□□ -1.19
CIITAP33076 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC7.63□□□□□ -1.19
CIITAP33076 AC106785.4-201ENST00000569492 412 ntBASIC7.63□□□□□ -1.19
CIITAP33076 RN7SL270P-201ENST00000579643 281 ntBASIC7.63□□□□□ -1.19
CIITAP33076 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7.63□□□□□ -1.19
CIITAP33076 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC7.63□□□□□ -1.19
CIITAP33076 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC7.63□□□□□ -1.19
CIITAP33076 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC7.63□□□□□ -1.19
CIITAP33076 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.63□□□□□ -1.19
CIITAP33076 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7.63□□□□□ -1.19
CIITAP33076 AC010333.3-201ENST00000615100 402 ntBASIC7.63□□□□□ -1.19
CIITAP33076 AC005514.1-201ENST00000623521 208 ntBASIC7.63□□□□□ -1.19
CIITAP33076 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
CIITAP33076 TEX41-255ENST00000626404 610 ntTSL 5 BASIC7.63□□□□□ -1.19
CIITAP33076 AC135068.11-201ENST00000636378 921 ntBASIC7.63□□□□□ -1.19
CIITAP33076 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.63□□□□□ -1.19
CIITAP33076 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.63□□□□□ -1.19
CIITAP33076 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CIITAP33076 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
CIITAP33076 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC7.63□□□□□ -1.19
CIITAP33076 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CIITAP33076 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CIITAP33076 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CIITAP33076 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.62□□□□□ -1.19
CIITAP33076 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC7.62□□□□□ -1.19
CIITAP33076 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC7.62□□□□□ -1.19
CIITAP33076 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.62□□□□□ -1.19
CIITAP33076 ZNF840P-201ENST00000504759 1996 ntBASIC7.62□□□□□ -1.19
CIITAP33076 MKI67P1-201ENST00000604297 1460 ntBASIC7.62□□□□□ -1.19
CIITAP33076 AC007993.1-201ENST00000621298 2430 ntBASIC7.62□□□□□ -1.19
CIITAP33076 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
CIITAP33076 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CIITAP33076 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CIITAP33076 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
CIITAP33076 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
CIITAP33076 AC010132.4-201ENST00000569883 1368 ntBASIC7.62□□□□□ -1.19
CIITAP33076 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CIITAP33076 SSXP3-201ENST00000442971 1300 ntBASIC7.62□□□□□ -1.19
CIITAP33076 PSMC1P6-201ENST00000477233 1319 ntBASIC7.62□□□□□ -1.19
CIITAP33076 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
CIITAP33076 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
CIITAP33076 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC7.62□□□□□ -1.19
CIITAP33076 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC7.62□□□□□ -1.19
CIITAP33076 TRGV5P-201ENST00000419915 354 ntBASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms