Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.09□□□□□ -1.59
AP1S3Q96PC3 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC5.09□□□□□ -1.59
AP1S3Q96PC3 C2orf83-204ENST00000641422 291 ntAPPRIS ALT2 BASIC5.09□□□□□ -1.59
AP1S3Q96PC3 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
AP1S3Q96PC3 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
AP1S3Q96PC3 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
AP1S3Q96PC3 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.09□□□□□ -1.59
AP1S3Q96PC3 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC5.09□□□□□ -1.59
AP1S3Q96PC3 AC105114.1-201ENST00000624795 1862 ntBASIC5.09□□□□□ -1.6
AP1S3Q96PC3 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
AP1S3Q96PC3 TNPO1P2-201ENST00000426249 2665 ntBASIC5.09□□□□□ -1.6
AP1S3Q96PC3 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.09□□□□□ -1.6
AP1S3Q96PC3 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
AP1S3Q96PC3 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
AP1S3Q96PC3 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
AP1S3Q96PC3 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 AL359694.2-201ENST00000567753 1615 ntBASIC5.08□□□□□ -1.6
AP1S3Q96PC3 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 NEK2P4-201ENST00000425793 1329 ntBASIC5.08□□□□□ -1.6
AP1S3Q96PC3 AL512310.3-201ENST00000547023 1335 ntBASIC5.08□□□□□ -1.6
AP1S3Q96PC3 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 RPL9P21-201ENST00000392269 505 ntBASIC5.08□□□□□ -1.6
AP1S3Q96PC3 AC096537.2-201ENST00000413707 714 ntBASIC5.08□□□□□ -1.6
AP1S3Q96PC3 PPIAP30-201ENST00000415473 519 ntBASIC5.08□□□□□ -1.6
AP1S3Q96PC3 RPSAP1-201ENST00000421328 880 ntBASIC5.08□□□□□ -1.6
AP1S3Q96PC3 OR7E117P-201ENST00000422682 1112 ntBASIC5.08□□□□□ -1.6
AP1S3Q96PC3 NPM1P30-201ENST00000425092 828 ntBASIC5.08□□□□□ -1.6
AP1S3Q96PC3 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 APCDD1L-AS1-204ENST00000427794 461 ntTSL 3 BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 AC068137.1-201ENST00000429272 584 ntBASIC5.08□□□□□ -1.6
AP1S3Q96PC3 LINC01827-201ENST00000432711 555 ntTSL 2 BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 AL606752.1-201ENST00000435442 666 ntBASIC5.08□□□□□ -1.6
AP1S3Q96PC3 BSNDP4-201ENST00000436076 388 ntBASIC5.08□□□□□ -1.6
AP1S3Q96PC3 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 AL606804.1-202ENST00000446347 481 ntTSL 2 BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 HSPA8P3-201ENST00000449300 780 ntBASIC5.08□□□□□ -1.6
AP1S3Q96PC3 RN7SL621P-201ENST00000472565 299 ntBASIC5.08□□□□□ -1.6
AP1S3Q96PC3 ADAMTS9-AS2-204ENST00000485174 573 ntTSL 4 BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 GGTA1P-204ENST00000488429 1104 ntBASIC5.08□□□□□ -1.6
AP1S3Q96PC3 CKMT2-AS1-206ENST00000511495 585 ntTSL 4 BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 LINC02162-201ENST00000512521 574 ntTSL 4 BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 AC114801.1-201ENST00000512633 297 ntBASIC5.08□□□□□ -1.6
AP1S3Q96PC3 AC011352.2-201ENST00000514574 1016 ntBASIC5.08□□□□□ -1.6
AP1S3Q96PC3 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 AC090539.2-201ENST00000523425 671 ntBASIC5.08□□□□□ -1.6
AP1S3Q96PC3 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 PLA2G1B-203ENST00000549767 562 ntTSL 2 BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 AC044860.3-201ENST00000559957 368 ntBASIC5.08□□□□□ -1.6
AP1S3Q96PC3 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 AC096708.2-201ENST00000577676 512 ntBASIC5.08□□□□□ -1.6
AP1S3Q96PC3 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 EIF1-207ENST00000591776 797 ntTSL 4 BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 HOTTIP_2.1-201ENST00000616633 376 ntBASIC5.08□□□□□ -1.6
AP1S3Q96PC3 BX005195.1-201ENST00000618097 1198 ntBASIC5.08□□□□□ -1.6
AP1S3Q96PC3 CCL4L2-216ENST00000620098 836 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 AC110769.3-201ENST00000624567 1173 ntBASIC5.08□□□□□ -1.6
AP1S3Q96PC3 AC119674.1-217ENST00000641942 1086 ntBASIC5.08□□□□□ -1.6
AP1S3Q96PC3 AL161912.4-201ENST00000623889 2468 ntBASIC5.08□□□□□ -1.6
AP1S3Q96PC3 ZNF655-222ENST00000493277 1815 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 AC025809.2-201ENST00000625085 1802 ntBASIC5.08□□□□□ -1.6
AP1S3Q96PC3 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 PARP4P1-201ENST00000435945 2337 ntBASIC5.08□□□□□ -1.6
AP1S3Q96PC3 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
AP1S3Q96PC3 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 AL137141.1-201ENST00000624622 4836 ntBASIC5.07□□□□□ -1.6
AP1S3Q96PC3 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
AP1S3Q96PC3 RN7SKP76-201ENST00000364419 323 ntBASIC5.07□□□□□ -1.6
AP1S3Q96PC3 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms