Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 AC005383.1-201ENST00000622689 534 ntBASIC6.16□□□□□ -1.42
C11orf88Q6PI97 AC073862.4-201ENST00000622982 854 ntBASIC6.16□□□□□ -1.42
C11orf88Q6PI97 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 KARSP2-201ENST00000415696 1639 ntBASIC6.16□□□□□ -1.42
C11orf88Q6PI97 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
C11orf88Q6PI97 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
C11orf88Q6PI97 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
C11orf88Q6PI97 MTCO1P7-201ENST00000419523 1542 ntBASIC6.15□□□□□ -1.42
C11orf88Q6PI97 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
C11orf88Q6PI97 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC6.15□□□□□ -1.42
C11orf88Q6PI97 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.15□□□□□ -1.42
C11orf88Q6PI97 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC6.15□□□□□ -1.42
C11orf88Q6PI97 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
C11orf88Q6PI97 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.15□□□□□ -1.42
C11orf88Q6PI97 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
C11orf88Q6PI97 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.15□□□□□ -1.42
C11orf88Q6PI97 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
C11orf88Q6PI97 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
C11orf88Q6PI97 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
C11orf88Q6PI97 RNU1-122P-201ENST00000365538 156 ntBASIC6.15□□□□□ -1.42
C11orf88Q6PI97 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
C11orf88Q6PI97 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
C11orf88Q6PI97 RN7SKP232-201ENST00000410170 290 ntBASIC6.15□□□□□ -1.42
C11orf88Q6PI97 AC243547.1-201ENST00000415065 408 ntTSL 2 BASIC6.15□□□□□ -1.42
C11orf88Q6PI97 AC023141.1-201ENST00000419418 379 ntBASIC6.15□□□□□ -1.42
C11orf88Q6PI97 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC6.15□□□□□ -1.42
C11orf88Q6PI97 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.15□□□□□ -1.42
C11orf88Q6PI97 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.15□□□□□ -1.42
C11orf88Q6PI97 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
C11orf88Q6PI97 SNX18P9-201ENST00000440580 835 ntBASIC6.15□□□□□ -1.42
C11orf88Q6PI97 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC6.15□□□□□ -1.42
C11orf88Q6PI97 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.15□□□□□ -1.42
C11orf88Q6PI97 RPS18P13-201ENST00000461260 454 ntBASIC6.15□□□□□ -1.42
C11orf88Q6PI97 RN7SL36P-201ENST00000469345 276 ntBASIC6.15□□□□□ -1.42
C11orf88Q6PI97 RN7SL145P-201ENST00000469955 296 ntBASIC6.15□□□□□ -1.42
C11orf88Q6PI97 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC6.15□□□□□ -1.42
C11orf88Q6PI97 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC6.15□□□□□ -1.42
C11orf88Q6PI97 REG4-204ENST00000530654 612 ntTSL 5 BASIC6.15□□□□□ -1.42
C11orf88Q6PI97 AC103855.4-201ENST00000533158 265 ntBASIC6.15□□□□□ -1.42
C11orf88Q6PI97 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC6.15□□□□□ -1.42
C11orf88Q6PI97 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.15□□□□□ -1.42
C11orf88Q6PI97 AC091304.5-201ENST00000568969 158 ntBASIC6.15□□□□□ -1.42
C11orf88Q6PI97 MIR5095-201ENST00000578844 88 ntBASIC6.15□□□□□ -1.42
C11orf88Q6PI97 MIR5192-201ENST00000579892 92 ntBASIC6.15□□□□□ -1.42
C11orf88Q6PI97 AP000919.1-201ENST00000582850 985 ntBASIC6.15□□□□□ -1.42
C11orf88Q6PI97 AC060766.6-201ENST00000589099 394 ntTSL 3 BASIC6.15□□□□□ -1.42
C11orf88Q6PI97 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC6.15□□□□□ -1.42
C11orf88Q6PI97 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.15□□□□□ -1.42
C11orf88Q6PI97 Z98949.1-208ENST00000597614 816 ntTSL 5 BASIC6.15□□□□□ -1.42
C11orf88Q6PI97 AL683813.2-201ENST00000605245 502 ntBASIC6.15□□□□□ -1.42
C11orf88Q6PI97 FAM27E3-202ENST00000614611 340 ntBASIC6.15□□□□□ -1.42
C11orf88Q6PI97 MIR6731-201ENST00000614863 72 ntBASIC6.15□□□□□ -1.42
C11orf88Q6PI97 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC6.15□□□□□ -1.42
C11orf88Q6PI97 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.15□□□□□ -1.42
C11orf88Q6PI97 TRDMT1-210ENST00000488990 1301 ntTSL 2 BASIC6.15□□□□□ -1.43
C11orf88Q6PI97 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
C11orf88Q6PI97 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
C11orf88Q6PI97 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
C11orf88Q6PI97 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
C11orf88Q6PI97 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
C11orf88Q6PI97 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
C11orf88Q6PI97 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.43
C11orf88Q6PI97 AP003471.1-202ENST00000319051 1988 ntBASIC6.15□□□□□ -1.43
C11orf88Q6PI97 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
C11orf88Q6PI97 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
C11orf88Q6PI97 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
C11orf88Q6PI97 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
C11orf88Q6PI97 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
C11orf88Q6PI97 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
C11orf88Q6PI97 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
C11orf88Q6PI97 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
C11orf88Q6PI97 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
C11orf88Q6PI97 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.14□□□□□ -1.43
C11orf88Q6PI97 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
C11orf88Q6PI97 AL136531.3-201ENST00000624378 3658 ntBASIC6.14□□□□□ -1.43
C11orf88Q6PI97 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
C11orf88Q6PI97 AC110597.1-201ENST00000562669 3176 ntBASIC6.14□□□□□ -1.43
C11orf88Q6PI97 OR9K2-201ENST00000305377 1122 ntBASIC6.14□□□□□ -1.43
C11orf88Q6PI97 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
C11orf88Q6PI97 Y_RNA.62-201ENST00000362840 99 ntBASIC6.14□□□□□ -1.43
C11orf88Q6PI97 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
C11orf88Q6PI97 AL590762.1-201ENST00000391782 432 ntBASIC6.14□□□□□ -1.43
C11orf88Q6PI97 RPL7-203ENST00000396466 762 ntTSL 3 BASIC6.14□□□□□ -1.43
C11orf88Q6PI97 GAS8-AS1-201ENST00000408886 435 ntBASIC6.14□□□□□ -1.43
C11orf88Q6PI97 PPIAP30-201ENST00000415473 519 ntBASIC6.14□□□□□ -1.43
C11orf88Q6PI97 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC6.14□□□□□ -1.43
C11orf88Q6PI97 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.14□□□□□ -1.43
C11orf88Q6PI97 GEMIN2P2-201ENST00000418195 715 ntBASIC6.14□□□□□ -1.43
C11orf88Q6PI97 PCBP1-AS1-212ENST00000418308 863 ntTSL 5 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms