Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
RHBDL3P58872 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RHBDL3P58872 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
RHBDL3P58872 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
RHBDL3P58872 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RHBDL3P58872 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC8.13□□□□□ -1.11
RHBDL3P58872 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RHBDL3P58872 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
RHBDL3P58872 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC8.13□□□□□ -1.11
RHBDL3P58872 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
RHBDL3P58872 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC8.13□□□□□ -1.11
RHBDL3P58872 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC8.12□□□□□ -1.11
RHBDL3P58872 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RHBDL3P58872 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC8.12□□□□□ -1.11
RHBDL3P58872 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC8.12□□□□□ -1.11
RHBDL3P58872 AC020978.6-201ENST00000571197 3177 ntBASIC8.12□□□□□ -1.11
RHBDL3P58872 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC8.12□□□□□ -1.11
RHBDL3P58872 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC8.12□□□□□ -1.11
RHBDL3P58872 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC8.12□□□□□ -1.11
RHBDL3P58872 AC005614.1-201ENST00000598952 3653 ntBASIC8.12□□□□□ -1.11
RHBDL3P58872 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RHBDL3P58872 AC137056.2-201ENST00000624055 1958 ntBASIC8.12□□□□□ -1.11
RHBDL3P58872 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RHBDL3P58872 AL096816.1-201ENST00000623300 2920 ntBASIC8.12□□□□□ -1.11
RHBDL3P58872 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RHBDL3P58872 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC8.12□□□□□ -1.11
RHBDL3P58872 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RHBDL3P58872 AC244452.1-201ENST00000413798 141 ntBASIC8.12□□□□□ -1.11
RHBDL3P58872 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC8.12□□□□□ -1.11
RHBDL3P58872 VN1R53P-201ENST00000429536 957 ntBASIC8.12□□□□□ -1.11
RHBDL3P58872 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RHBDL3P58872 UBE2V2P3-201ENST00000433562 437 ntBASIC8.12□□□□□ -1.11
RHBDL3P58872 PFN1P11-201ENST00000445829 389 ntBASIC8.12□□□□□ -1.11
RHBDL3P58872 MARK2P8-201ENST00000476069 952 ntBASIC8.12□□□□□ -1.11
RHBDL3P58872 OR9A1P-202ENST00000484361 945 ntBASIC8.12□□□□□ -1.11
RHBDL3P58872 RPL29P23-201ENST00000486188 442 ntBASIC8.12□□□□□ -1.11
RHBDL3P58872 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
RHBDL3P58872 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
RHBDL3P58872 RNA5SP473-201ENST00000516402 125 ntBASIC8.12□□□□□ -1.11
RHBDL3P58872 PTTG3P-201ENST00000521862 606 ntBASIC8.12□□□□□ -1.11
RHBDL3P58872 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RHBDL3P58872 TRAV11-201ENST00000539512 339 ntBASIC8.12□□□□□ -1.11
RHBDL3P58872 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC8.12□□□□□ -1.11
RHBDL3P58872 AC107958.1-201ENST00000556576 290 ntBASIC8.12□□□□□ -1.11
RHBDL3P58872 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC8.12□□□□□ -1.11
RHBDL3P58872 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC8.12□□□□□ -1.11
RHBDL3P58872 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC8.12□□□□□ -1.11
RHBDL3P58872 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC8.12□□□□□ -1.11
RHBDL3P58872 WBP1LP12-201ENST00000604449 331 ntBASIC8.12□□□□□ -1.11
RHBDL3P58872 NDUFB9P1-201ENST00000604683 510 ntBASIC8.12□□□□□ -1.11
RHBDL3P58872 AC019257.2-201ENST00000605539 497 ntBASIC8.12□□□□□ -1.11
RHBDL3P58872 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC8.12□□□□□ -1.11
RHBDL3P58872 AC027348.2-201ENST00000624375 642 ntBASIC8.12□□□□□ -1.11
RHBDL3P58872 TEX41-293ENST00000630451 690 ntTSL 5 BASIC8.12□□□□□ -1.11
RHBDL3P58872 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
RHBDL3P58872 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RHBDL3P58872 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
RHBDL3P58872 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC8.12□□□□□ -1.11
RHBDL3P58872 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
RHBDL3P58872 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC8.12□□□□□ -1.11
RHBDL3P58872 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC8.12□□□□□ -1.11
RHBDL3P58872 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
RHBDL3P58872 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC8.12□□□□□ -1.11
RHBDL3P58872 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
RHBDL3P58872 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RHBDL3P58872 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
RHBDL3P58872 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC8.11□□□□□ -1.11
RHBDL3P58872 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC8.11□□□□□ -1.11
RHBDL3P58872 ZNF812P-201ENST00000457674 1694 ntBASIC8.11□□□□□ -1.11
RHBDL3P58872 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
RHBDL3P58872 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC8.11□□□□□ -1.11
RHBDL3P58872 PPBPP2-201ENST00000513150 1362 ntBASIC8.11□□□□□ -1.11
RHBDL3P58872 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC8.11□□□□□ -1.11
RHBDL3P58872 ATM-215ENST00000530958 5718 ntTSL 2 BASIC8.11□□□□□ -1.11
RHBDL3P58872 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
RHBDL3P58872 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RHBDL3P58872 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RHBDL3P58872 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
RHBDL3P58872 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
RHBDL3P58872 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
RHBDL3P58872 RN7SKP250-201ENST00000363924 321 ntBASIC8.11□□□□□ -1.11
RHBDL3P58872 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC8.11□□□□□ -1.11
RHBDL3P58872 THEM7P-201ENST00000419556 672 ntBASIC8.11□□□□□ -1.11
RHBDL3P58872 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC8.11□□□□□ -1.11
RHBDL3P58872 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RHBDL3P58872 NPM1P23-201ENST00000440193 849 ntBASIC8.11□□□□□ -1.11
RHBDL3P58872 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC8.11□□□□□ -1.11
RHBDL3P58872 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC8.11□□□□□ -1.11
RHBDL3P58872 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC8.11□□□□□ -1.11
RHBDL3P58872 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC8.11□□□□□ -1.11
RHBDL3P58872 RNU6-775P-201ENST00000459318 96 ntBASIC8.11□□□□□ -1.11
RHBDL3P58872 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RHBDL3P58872 AC112225.1-201ENST00000508230 297 ntBASIC8.11□□□□□ -1.11
RHBDL3P58872 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC8.11□□□□□ -1.11
RHBDL3P58872 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC8.11□□□□□ -1.11
RHBDL3P58872 AC023310.2-201ENST00000553844 547 ntBASIC8.11□□□□□ -1.11
RHBDL3P58872 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
RHBDL3P58872 OOSP1P2-201ENST00000579644 351 ntBASIC8.11□□□□□ -1.11
RHBDL3P58872 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC8.11□□□□□ -1.11
RHBDL3P58872 WBP1LP11-201ENST00000586141 328 ntBASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms