Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC5.16□□□□□ -1.58
CXCL1P09341 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.16□□□□□ -1.58
CXCL1P09341 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL1P09341 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CXCL1P09341 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL1P09341 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CXCL1P09341 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL1P09341 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CXCL1P09341 EEF1A1P2-201ENST00000553854 1447 ntBASIC5.16□□□□□ -1.58
CXCL1P09341 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL1P09341 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL1P09341 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CXCL1P09341 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL1P09341 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC5.16□□□□□ -1.58
CXCL1P09341 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.16□□□□□ -1.58
CXCL1P09341 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CXCL1P09341 GPR15-201ENST00000284311 1252 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CXCL1P09341 IL37-203ENST00000349806 589 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL1P09341 SNORA70.8-201ENST00000384231 136 ntBASIC5.16□□□□□ -1.58
CXCL1P09341 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CXCL1P09341 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CXCL1P09341 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL1P09341 AC012560.1-202ENST00000421324 535 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL1P09341 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.16□□□□□ -1.58
CXCL1P09341 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC5.16□□□□□ -1.58
CXCL1P09341 RPL5P2-201ENST00000429598 854 ntBASIC5.16□□□□□ -1.58
CXCL1P09341 LINC01508-202ENST00000436671 755 ntTSL 3 BASIC5.16□□□□□ -1.58
CXCL1P09341 LINC01284-201ENST00000442994 730 ntTSL 5 BASIC5.16□□□□□ -1.58
CXCL1P09341 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC5.16□□□□□ -1.58
CXCL1P09341 BX323845.2-201ENST00000458382 234 ntBASIC5.16□□□□□ -1.58
CXCL1P09341 RPS18P13-201ENST00000461260 454 ntBASIC5.16□□□□□ -1.58
CXCL1P09341 AC140125.3-202ENST00000504362 348 ntTSL 3 BASIC5.16□□□□□ -1.58
CXCL1P09341 AC006070.1-201ENST00000508151 193 ntBASIC5.16□□□□□ -1.58
CXCL1P09341 AC138965.1-201ENST00000509329 348 ntTSL 3 BASIC5.16□□□□□ -1.58
CXCL1P09341 CKMT2-AS1-206ENST00000511495 585 ntTSL 4 BASIC5.16□□□□□ -1.58
CXCL1P09341 DCSTAMP-203ENST00000517991 949 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL1P09341 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC5.16□□□□□ -1.58
CXCL1P09341 C11orf70-202ENST00000526781 845 ntTSL 3 BASIC5.16□□□□□ -1.58
CXCL1P09341 AP001782.1-202ENST00000527774 445 ntTSL 3 BASIC5.16□□□□□ -1.58
CXCL1P09341 AP006587.5-201ENST00000532033 739 ntBASIC5.16□□□□□ -1.58
CXCL1P09341 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC5.16□□□□□ -1.58
CXCL1P09341 AC087241.3-201ENST00000542076 862 ntTSL 2 BASIC5.16□□□□□ -1.58
CXCL1P09341 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.16□□□□□ -1.58
CXCL1P09341 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC5.16□□□□□ -1.58
CXCL1P09341 CRADD-211ENST00000552983 839 ntTSL 5 BASIC5.16□□□□□ -1.58
CXCL1P09341 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL1P09341 AC073657.1-202ENST00000562063 334 ntTSL 3 BASIC5.16□□□□□ -1.58
CXCL1P09341 AC092133.1-201ENST00000565828 719 ntBASIC5.16□□□□□ -1.58
CXCL1P09341 AC004232.1-201ENST00000571388 208 ntBASIC5.16□□□□□ -1.58
CXCL1P09341 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC5.16□□□□□ -1.58
CXCL1P09341 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC5.16□□□□□ -1.58
CXCL1P09341 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC5.16□□□□□ -1.58
CXCL1P09341 Metazoa_SRP.124-201ENST00000610352 345 ntBASIC5.16□□□□□ -1.58
CXCL1P09341 AL353898.2-201ENST00000623000 255 ntBASIC5.16□□□□□ -1.58
CXCL1P09341 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CXCL1P09341 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CXCL1P09341 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL1P09341 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL1P09341 AL359976.1-201ENST00000418655 3528 ntBASIC5.16□□□□□ -1.58
CXCL1P09341 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC5.16□□□□□ -1.58
CXCL1P09341 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL1P09341 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL1P09341 SAMM50P1-201ENST00000455403 1399 ntBASIC5.16□□□□□ -1.58
CXCL1P09341 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
CXCL1P09341 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL1P09341 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.16□□□□□ -1.58
CXCL1P09341 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.16□□□□□ -1.58
CXCL1P09341 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC5.15□□□□□ -1.58
CXCL1P09341 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CXCL1P09341 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CXCL1P09341 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC5.15□□□□□ -1.58
CXCL1P09341 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CXCL1P09341 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
CXCL1P09341 HIKESHI-201ENST00000278483 1113 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CXCL1P09341 OR2AT4-201ENST00000305159 1042 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CXCL1P09341 BTF3-201ENST00000335895 897 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CXCL1P09341 RNA5SP71-201ENST00000362967 126 ntBASIC5.15□□□□□ -1.59
CXCL1P09341 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
CXCL1P09341 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.15□□□□□ -1.59
CXCL1P09341 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC5.15□□□□□ -1.59
CXCL1P09341 OR7E117P-201ENST00000422682 1112 ntBASIC5.15□□□□□ -1.59
CXCL1P09341 NPM1P30-201ENST00000425092 828 ntBASIC5.15□□□□□ -1.59
CXCL1P09341 G6PC2-204ENST00000429379 645 ntTSL 2 BASIC5.15□□□□□ -1.59
CXCL1P09341 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC5.15□□□□□ -1.59
CXCL1P09341 AL606752.1-201ENST00000435442 666 ntBASIC5.15□□□□□ -1.59
CXCL1P09341 AL604028.2-201ENST00000437848 788 ntBASIC5.15□□□□□ -1.59
CXCL1P09341 CICP10-201ENST00000439497 198 ntBASIC5.15□□□□□ -1.59
CXCL1P09341 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC5.15□□□□□ -1.59
CXCL1P09341 AL049820.1-201ENST00000442936 423 ntTSL 2 BASIC5.15□□□□□ -1.59
CXCL1P09341 BX005266.3-201ENST00000443013 1075 ntBASIC5.15□□□□□ -1.59
CXCL1P09341 RPL34P22-201ENST00000468193 318 ntBASIC5.15□□□□□ -1.59
CXCL1P09341 LINC02010-201ENST00000470860 516 ntTSL 4 BASIC5.15□□□□□ -1.59
CXCL1P09341 RN7SL621P-201ENST00000472565 299 ntBASIC5.15□□□□□ -1.59
CXCL1P09341 AC006387.1-203ENST00000494849 342 ntTSL 3 BASIC5.15□□□□□ -1.59
CXCL1P09341 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC5.15□□□□□ -1.59
CXCL1P09341 AC122713.1-201ENST00000518368 1015 ntBASIC5.15□□□□□ -1.59
CXCL1P09341 AC243972.1-201ENST00000542992 570 ntTSL 4 BASIC5.15□□□□□ -1.59
CXCL1P09341 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CXCL1P09341 AL034376.2-201ENST00000568110 573 ntTSL 2 BASIC5.15□□□□□ -1.59
CXCL1P09341 ACTG1P15-201ENST00000570019 1063 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms