Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 RPL29P7-201ENST00000440227 457 ntBASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 BX323845.2-201ENST00000458382 234 ntBASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 AC063943.2-201ENST00000495697 534 ntBASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 CC2D2A-207ENST00000507954 548 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 AP001803.1-201ENST00000525668 147 ntBASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 OR5M6P-201ENST00000530227 937 ntBASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 AC012510.1-201ENST00000607946 759 ntBASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 AL031777.2-201ENST00000611953 196 ntBASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 AC079414.3-201ENST00000612986 1090 ntBASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 OR1N1-202ENST00000619659 939 ntBASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 AL356585.10-201ENST00000641883 123 ntBASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 FO082842.1-201ENST00000423552 1370 ntBASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 CDY19P-201ENST00000411668 1613 ntBASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 CDY18P-201ENST00000438294 1609 ntBASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 AC090774.4-201ENST00000578888 1372 ntBASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 RN7SKP55-201ENST00000364888 307 ntBASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 CHCHD3P1-201ENST00000425516 676 ntBASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 SLC25A24P1-202ENST00000434803 1220 ntBASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 NDUFA3P2-201ENST00000531434 232 ntBASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 PSMC1P8-201ENST00000536820 1296 ntBASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 MIR4786-201ENST00000583954 80 ntBASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 EXOSC3P2-201ENST00000594464 497 ntBASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 AL161931.1-201ENST00000612768 246 ntBASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 AC026951.2-201ENST00000613847 241 ntBASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 AP003789.1-201ENST00000617737 605 ntBASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 AC005899.7-201ENST00000618199 588 ntBASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 AC073862.4-201ENST00000622982 854 ntBASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 AC087894.3-201ENST00000623682 349 ntBASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 AL596275.2-208ENST00000641192 594 ntBASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 AL354702.2-202ENST00000641481 890 ntBASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC5.99□□□□□ -1.45
RHBDD3Q9Y3P4 TRDMT1-210ENST00000488990 1301 ntTSL 2 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms