Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SSX3Q99909 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SSX3Q99909 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
SSX3Q99909 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SSX3Q99909 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.94□□□□□ -1.46
SSX3Q99909 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SSX3Q99909 AC074375.1-201ENST00000372993 192 ntBASIC5.94□□□□□ -1.46
SSX3Q99909 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SSX3Q99909 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC5.94□□□□□ -1.46
SSX3Q99909 SNORA3.1-201ENST00000408166 111 ntBASIC5.94□□□□□ -1.46
SSX3Q99909 AC009413.1-201ENST00000414823 399 ntBASIC5.94□□□□□ -1.46
SSX3Q99909 AC097713.1-201ENST00000418025 562 ntTSL 4 BASIC5.94□□□□□ -1.46
SSX3Q99909 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC5.94□□□□□ -1.46
SSX3Q99909 AL138479.1-201ENST00000426913 484 ntBASIC5.94□□□□□ -1.46
SSX3Q99909 AC091390.2-201ENST00000432573 374 ntBASIC5.94□□□□□ -1.46
SSX3Q99909 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC5.94□□□□□ -1.46
SSX3Q99909 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC5.94□□□□□ -1.46
SSX3Q99909 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC5.94□□□□□ -1.46
SSX3Q99909 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC5.94□□□□□ -1.46
SSX3Q99909 RN7SL251P-201ENST00000464175 297 ntBASIC5.94□□□□□ -1.46
SSX3Q99909 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC5.94□□□□□ -1.46
SSX3Q99909 AC084878.1-201ENST00000480555 648 ntBASIC5.94□□□□□ -1.46
SSX3Q99909 ANK3-213ENST00000486349 493 ntTSL 2 BASIC5.94□□□□□ -1.46
SSX3Q99909 AC074386.1-206ENST00000487102 761 ntBASIC5.94□□□□□ -1.46
SSX3Q99909 OR2A3P-201ENST00000493774 953 ntBASIC5.94□□□□□ -1.46
SSX3Q99909 OR4C1P-201ENST00000530880 937 ntBASIC5.94□□□□□ -1.46
SSX3Q99909 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.94□□□□□ -1.46
SSX3Q99909 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC5.94□□□□□ -1.46
SSX3Q99909 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC5.94□□□□□ -1.46
SSX3Q99909 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC5.94□□□□□ -1.46
SSX3Q99909 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC5.94□□□□□ -1.46
SSX3Q99909 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC5.94□□□□□ -1.46
SSX3Q99909 AC138749.2-201ENST00000566048 167 ntBASIC5.94□□□□□ -1.46
SSX3Q99909 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.94□□□□□ -1.46
SSX3Q99909 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.94□□□□□ -1.46
SSX3Q99909 AL583859.2-202ENST00000602311 505 ntTSL 5 BASIC5.94□□□□□ -1.46
SSX3Q99909 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC5.94□□□□□ -1.46
SSX3Q99909 AC012640.3-201ENST00000607847 430 ntBASIC5.94□□□□□ -1.46
SSX3Q99909 AC097381.3-201ENST00000608962 462 ntBASIC5.94□□□□□ -1.46
SSX3Q99909 AL139123.1-201ENST00000612008 430 ntBASIC5.94□□□□□ -1.46
SSX3Q99909 uc_338.21-201ENST00000622458 147 ntBASIC5.94□□□□□ -1.46
SSX3Q99909 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC5.94□□□□□ -1.46
SSX3Q99909 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC5.94□□□□□ -1.46
SSX3Q99909 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
SSX3Q99909 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SSX3Q99909 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC5.94□□□□□ -1.46
SSX3Q99909 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SSX3Q99909 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
SSX3Q99909 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
SSX3Q99909 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SSX3Q99909 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SSX3Q99909 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SSX3Q99909 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC5.94□□□□□ -1.46
SSX3Q99909 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SSX3Q99909 HSPD1P1-201ENST00000503199 1726 ntBASIC5.94□□□□□ -1.46
SSX3Q99909 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.93□□□□□ -1.46
SSX3Q99909 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SSX3Q99909 AP003471.1-202ENST00000319051 1988 ntBASIC5.93□□□□□ -1.46
SSX3Q99909 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SSX3Q99909 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
SSX3Q99909 WNK1-220ENST00000574564 1401 ntBASIC5.93□□□□□ -1.46
SSX3Q99909 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SSX3Q99909 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC5.93□□□□□ -1.46
SSX3Q99909 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.93□□□□□ -1.46
SSX3Q99909 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SSX3Q99909 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC5.93□□□□□ -1.46
SSX3Q99909 AC023886.2-201ENST00000321285 411 ntBASIC5.93□□□□□ -1.46
SSX3Q99909 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SSX3Q99909 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SSX3Q99909 TMEM213-201ENST00000397602 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SSX3Q99909 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SSX3Q99909 CBX1P3-201ENST00000413296 527 ntBASIC5.93□□□□□ -1.46
SSX3Q99909 Z83313.1-201ENST00000433780 718 ntBASIC5.93□□□□□ -1.46
SSX3Q99909 AL158214.1-201ENST00000444423 404 ntBASIC5.93□□□□□ -1.46
SSX3Q99909 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SSX3Q99909 TUBBP11-201ENST00000472255 252 ntBASIC5.93□□□□□ -1.46
SSX3Q99909 AC073648.3-201ENST00000504939 925 ntBASIC5.93□□□□□ -1.46
SSX3Q99909 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC5.93□□□□□ -1.46
SSX3Q99909 KCTD9P6-201ENST00000522306 950 ntBASIC5.93□□□□□ -1.46
SSX3Q99909 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC5.93□□□□□ -1.46
SSX3Q99909 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC5.93□□□□□ -1.46
SSX3Q99909 AC233290.1-201ENST00000553021 1186 ntBASIC5.93□□□□□ -1.46
SSX3Q99909 RPS7P1-201ENST00000571702 585 ntBASIC5.93□□□□□ -1.46
SSX3Q99909 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC5.93□□□□□ -1.46
SSX3Q99909 AC023389.2-201ENST00000580031 955 ntBASIC5.93□□□□□ -1.46
SSX3Q99909 AP001554.1-201ENST00000604533 376 ntBASIC5.93□□□□□ -1.46
SSX3Q99909 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC5.93□□□□□ -1.46
SSX3Q99909 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC5.93□□□□□ -1.46
SSX3Q99909 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC5.93□□□□□ -1.46
SSX3Q99909 AL031658.2-201ENST00000616850 651 ntBASIC5.93□□□□□ -1.46
SSX3Q99909 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC5.93□□□□□ -1.46
SSX3Q99909 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC5.93□□□□□ -1.46
SSX3Q99909 AL590396.3-201ENST00000636334 300 ntBASIC5.93□□□□□ -1.46
SSX3Q99909 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SSX3Q99909 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SSX3Q99909 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SSX3Q99909 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SSX3Q99909 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
SSX3Q99909 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.93□□□□□ -1.46
SSX3Q99909 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms