Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 RPL5P8-201ENST00000396820 815 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 HNRNPH1P2-201ENST00000396845 1210 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AL590143.1-201ENST00000405071 138 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 RPL36P1-201ENST00000419720 225 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AC099782.1-201ENST00000425889 474 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AC245047.5-201ENST00000437312 556 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AC144530.1-201ENST00000452862 555 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 MYL2-203ENST00000548438 664 ntTSL 3 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AC051619.2-201ENST00000559063 397 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 RBM4-213ENST00000578778 582 ntTSL 4 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AP005329.3-201ENST00000609924 686 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AC104083.1-201ENST00000569449 2615 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 GCNT7-202ENST00000617620 1355 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AC010401.2-201ENST00000575137 4934 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AL133243.4-201ENST00000623116 3109 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 EXOC5-211ENST00000621441 10589 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 TANC2-201ENST00000389520 6404 ntTSL 5 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 RPL17P17-201ENST00000419491 557 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 GTF2IP14-201ENST00000441415 586 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AL096803.1-201ENST00000456921 1021 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AC108120.1-201ENST00000506543 991 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 MBTD1-203ENST00000415868 5099 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AC010442.1-201ENST00000515583 816 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 RN7SKP70-201ENST00000516655 271 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AC024267.2-201ENST00000582737 417 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 MIR6071-201ENST00000616741 78 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 FAM83F-201ENST00000333407 15561 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 HSPA8P11-201ENST00000508840 1898 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 GMFG-201ENST00000253054 616 ntTSL 5 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 RPSAP40-201ENST00000442343 891 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 PFN1P11-201ENST00000445829 389 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 RN7SL70P-201ENST00000478322 302 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 RN7SL849P-201ENST00000485236 295 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 RN7SL101P-201ENST00000496350 279 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 OR5BK1P-201ENST00000550421 823 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 MIR4271-201ENST00000582451 67 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 AL596275.2-207ENST00000641188 675 ntBASIC2.1□□□□□ -2.07
SYNE1Q8NF91 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
SYNE1Q8NF91 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms