Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 SNORD15A-201ENST00000384214 148 ntBASIC6.17□□□□□ -1.42
C11orf88Q6PI97 MIR498-201ENST00000385134 124 ntBASIC6.17□□□□□ -1.42
C11orf88Q6PI97 HNRNPH1P2-201ENST00000396845 1210 ntBASIC6.17□□□□□ -1.42
C11orf88Q6PI97 TERF1P4-201ENST00000399580 1115 ntBASIC6.17□□□□□ -1.42
C11orf88Q6PI97 CNN3P1-201ENST00000401596 935 ntBASIC6.17□□□□□ -1.42
C11orf88Q6PI97 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 VN1R35P-201ENST00000428102 693 ntBASIC6.17□□□□□ -1.42
C11orf88Q6PI97 BX119904.3-201ENST00000428194 957 ntBASIC6.17□□□□□ -1.42
C11orf88Q6PI97 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 AC007000.1-201ENST00000453064 794 ntBASIC6.17□□□□□ -1.42
C11orf88Q6PI97 AGKP1-201ENST00000455254 1263 ntBASIC6.17□□□□□ -1.42
C11orf88Q6PI97 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 AC040975.1-201ENST00000472104 316 ntBASIC6.17□□□□□ -1.42
C11orf88Q6PI97 AC128716.1-201ENST00000475129 166 ntBASIC6.17□□□□□ -1.42
C11orf88Q6PI97 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 AC079768.1-201ENST00000503181 711 ntBASIC6.17□□□□□ -1.42
C11orf88Q6PI97 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 OSTC-204ENST00000512478 663 ntTSL 5 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 COX6CP11-201ENST00000555293 229 ntBASIC6.17□□□□□ -1.42
C11orf88Q6PI97 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 AC090415.1-201ENST00000581877 847 ntBASIC6.17□□□□□ -1.42
C11orf88Q6PI97 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 AC009955.2-201ENST00000597288 542 ntBASIC6.17□□□□□ -1.42
C11orf88Q6PI97 AC067838.1-201ENST00000606064 577 ntBASIC6.17□□□□□ -1.42
C11orf88Q6PI97 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 AC024475.4-201ENST00000635144 1206 ntTSL 5 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 LIPF-202ENST00000355843 1357 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.17□□□□□ -1.42
C11orf88Q6PI97 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 WNK1-220ENST00000574564 1401 ntBASIC6.16□□□□□ -1.42
C11orf88Q6PI97 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 CEP41-203ENST00000343969 1087 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 U3.48-201ENST00000363172 216 ntBASIC6.16□□□□□ -1.42
C11orf88Q6PI97 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 AL139327.1-201ENST00000382988 348 ntBASIC6.16□□□□□ -1.42
C11orf88Q6PI97 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 AC234781.4-201ENST00000419384 244 ntBASIC6.16□□□□□ -1.42
C11orf88Q6PI97 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 PRUNEP1-201ENST00000425846 705 ntBASIC6.16□□□□□ -1.42
C11orf88Q6PI97 BX322234.2-202ENST00000435612 479 ntTSL 3 BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 AC004692.1-201ENST00000455430 424 ntBASIC6.16□□□□□ -1.42
C11orf88Q6PI97 AC087385.2-201ENST00000477729 498 ntBASIC6.16□□□□□ -1.42
C11orf88Q6PI97 RN7SL282P-201ENST00000479676 297 ntBASIC6.16□□□□□ -1.42
C11orf88Q6PI97 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 AP004833.1-201ENST00000507987 1238 ntBASIC6.16□□□□□ -1.42
C11orf88Q6PI97 RN7SKP242-201ENST00000515967 289 ntBASIC6.16□□□□□ -1.42
C11orf88Q6PI97 AP001994.1-201ENST00000527539 826 ntBASIC6.16□□□□□ -1.42
C11orf88Q6PI97 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 AC018523.1-201ENST00000534211 512 ntBASIC6.16□□□□□ -1.42
C11orf88Q6PI97 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 BMS1P15-201ENST00000554269 1141 ntBASIC6.16□□□□□ -1.42
C11orf88Q6PI97 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 RN7SL178P-201ENST00000582930 304 ntBASIC6.16□□□□□ -1.42
C11orf88Q6PI97 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.16□□□□□ -1.42
C11orf88Q6PI97 RPS28P1-201ENST00000604589 187 ntBASIC6.16□□□□□ -1.42
C11orf88Q6PI97 AL109936.2-201ENST00000605350 650 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms