Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SUMO3P55854 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.52□□□□□ -1.37
SUMO3P55854 FKBP1AP4-201ENST00000631775 336 ntBASIC6.52□□□□□ -1.37
SUMO3P55854 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC6.52□□□□□ -1.37
SUMO3P55854 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
SUMO3P55854 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SUMO3P55854 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SUMO3P55854 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC6.52□□□□□ -1.37
SUMO3P55854 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.52□□□□□ -1.37
SUMO3P55854 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.52□□□□□ -1.37
SUMO3P55854 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SUMO3P55854 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SUMO3P55854 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SUMO3P55854 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
SUMO3P55854 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.52□□□□□ -1.37
SUMO3P55854 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
SUMO3P55854 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SUMO3P55854 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC6.52□□□□□ -1.37
SUMO3P55854 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SUMO3P55854 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
SUMO3P55854 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SUMO3P55854 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SUMO3P55854 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SUMO3P55854 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
SUMO3P55854 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SUMO3P55854 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
SUMO3P55854 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SUMO3P55854 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SUMO3P55854 AC017002.4-201ENST00000604721 1525 ntBASIC6.51□□□□□ -1.37
SUMO3P55854 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SUMO3P55854 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
SUMO3P55854 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SUMO3P55854 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SUMO3P55854 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC6.51□□□□□ -1.37
SUMO3P55854 ICE2P1-201ENST00000512800 1849 ntBASIC6.51□□□□□ -1.37
SUMO3P55854 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SUMO3P55854 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SUMO3P55854 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
SUMO3P55854 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.51□□□□□ -1.37
SUMO3P55854 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SUMO3P55854 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC6.51□□□□□ -1.37
SUMO3P55854 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
SUMO3P55854 RN7SKP107-201ENST00000364157 290 ntBASIC6.51□□□□□ -1.37
SUMO3P55854 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
SUMO3P55854 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SUMO3P55854 RNU6-925P-201ENST00000384629 104 ntBASIC6.51□□□□□ -1.37
SUMO3P55854 MIR152-201ENST00000385212 87 ntBASIC6.51□□□□□ -1.37
SUMO3P55854 AL590762.1-201ENST00000391782 432 ntBASIC6.51□□□□□ -1.37
SUMO3P55854 FAUP2-201ENST00000394301 401 ntBASIC6.51□□□□□ -1.37
SUMO3P55854 AL035405.1-201ENST00000400795 710 ntBASIC6.51□□□□□ -1.37
SUMO3P55854 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.51□□□□□ -1.37
SUMO3P55854 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.51□□□□□ -1.37
SUMO3P55854 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SUMO3P55854 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SUMO3P55854 ANXA2P2-201ENST00000435128 1020 ntBASIC6.51□□□□□ -1.37
SUMO3P55854 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC6.51□□□□□ -1.37
SUMO3P55854 AC006326.1-201ENST00000445465 787 ntBASIC6.51□□□□□ -1.37
SUMO3P55854 AC019080.2-201ENST00000453859 394 ntBASIC6.51□□□□□ -1.37
SUMO3P55854 CTSLP6-201ENST00000458273 1002 ntBASIC6.51□□□□□ -1.37
SUMO3P55854 RN7SL325P-201ENST00000460434 283 ntBASIC6.51□□□□□ -1.37
SUMO3P55854 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.51□□□□□ -1.37
SUMO3P55854 AC018635.1-201ENST00000468292 1030 ntBASIC6.51□□□□□ -1.37
SUMO3P55854 RN7SL160P-201ENST00000468558 284 ntBASIC6.51□□□□□ -1.37
SUMO3P55854 AC108729.2-201ENST00000476543 840 ntBASIC6.51□□□□□ -1.37
SUMO3P55854 MYL6P4-201ENST00000477911 453 ntBASIC6.51□□□□□ -1.37
SUMO3P55854 ANK3-213ENST00000486349 493 ntTSL 2 BASIC6.51□□□□□ -1.37
SUMO3P55854 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SUMO3P55854 AC138409.2-202ENST00000507274 458 ntBASIC6.51□□□□□ -1.37
SUMO3P55854 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC6.51□□□□□ -1.37
SUMO3P55854 MTND1P6-201ENST00000523621 946 ntBASIC6.51□□□□□ -1.37
SUMO3P55854 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC6.51□□□□□ -1.37
SUMO3P55854 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.51□□□□□ -1.37
SUMO3P55854 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC6.51□□□□□ -1.37
SUMO3P55854 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC6.51□□□□□ -1.37
SUMO3P55854 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
SUMO3P55854 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SUMO3P55854 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC6.51□□□□□ -1.37
SUMO3P55854 AL365223.1-201ENST00000574864 1297 ntBASIC6.51□□□□□ -1.37
SUMO3P55854 AC024614.1-201ENST00000577546 307 ntBASIC6.51□□□□□ -1.37
SUMO3P55854 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC6.51□□□□□ -1.37
SUMO3P55854 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC6.51□□□□□ -1.37
SUMO3P55854 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC6.51□□□□□ -1.37
SUMO3P55854 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC6.51□□□□□ -1.37
SUMO3P55854 AC090330.1-201ENST00000588646 764 ntBASIC6.51□□□□□ -1.37
SUMO3P55854 MTATP6P2-201ENST00000603319 678 ntBASIC6.51□□□□□ -1.37
SUMO3P55854 AC005070.2-201ENST00000604391 260 ntBASIC6.51□□□□□ -1.37
SUMO3P55854 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
SUMO3P55854 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC6.51□□□□□ -1.37
SUMO3P55854 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC6.51□□□□□ -1.37
SUMO3P55854 AC104184.1-201ENST00000607513 721 ntBASIC6.51□□□□□ -1.37
SUMO3P55854 AC018690.1-201ENST00000608144 626 ntBASIC6.51□□□□□ -1.37
SUMO3P55854 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC6.51□□□□□ -1.37
SUMO3P55854 AL096803.3-201ENST00000609032 532 ntBASIC6.51□□□□□ -1.37
SUMO3P55854 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC6.51□□□□□ -1.37
SUMO3P55854 AL049541.2-201ENST00000626377 555 ntBASIC6.51□□□□□ -1.37
SUMO3P55854 JAML-213ENST00000640745 951 ntTSL 5 BASIC6.51□□□□□ -1.37
SUMO3P55854 PRNCR1-201ENST00000635449 12727 ntBASIC6.51□□□□□ -1.37
SUMO3P55854 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SUMO3P55854 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SUMO3P55854 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms