Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 LSM3P3-201ENST00000436601 306 ntBASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 AC092421.1-201ENST00000448148 418 ntBASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 AL928654.1-201ENST00000476081 354 ntBASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 AL591122.1-201ENST00000487348 492 ntBASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 RPS20-202ENST00000518875 671 ntTSL 2 BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 OXR1-212ENST00000521592 993 ntTSL 5 BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 OR4A13P-201ENST00000529316 942 ntBASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 MIR1273F-201ENST00000580581 99 ntBASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 AL049829.3-202ENST00000604278 711 ntBASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 AL157762.1-201ENST00000619612 415 ntBASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 OR4G1P-202ENST00000641173 1788 ntBASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 CREM-216ENST00000429130 1476 ntTSL 5 BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 CDY5P-201ENST00000411487 1580 ntBASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 CDY9P-201ENST00000451397 1580 ntBASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 U3.14-201ENST00000365363 227 ntBASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 VDAC1P10-201ENST00000416715 891 ntBASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 AC134879.1-201ENST00000426062 394 ntBASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 ANXA2P2-201ENST00000435128 1020 ntBASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 PCMTD1P3-201ENST00000451824 472 ntBASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 RPL34P34-201ENST00000465389 354 ntBASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 AP000805.1-201ENST00000471604 784 ntBASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 RN7SL143P-201ENST00000496780 297 ntBASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 AC023818.1-201ENST00000498379 384 ntBASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 AL132640.2-202ENST00000559732 614 ntBASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 AC024451.4-201ENST00000602578 752 ntBASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 MIR6726-201ENST00000613751 61 ntBASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 MAPK10-357ENST00000641831 2858 ntBASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 AC011504.1-201ENST00000623331 4103 ntBASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 ZNF658B-201ENST00000602828 3408 ntBASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 AC022905.1-201ENST00000503430 3048 ntBASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 AL136531.3-201ENST00000624378 3658 ntBASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 AP002800.1-201ENST00000624982 2225 ntBASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 USP9YP3-201ENST00000434481 1766 ntBASIC6.01□□□□□ -1.45
RHBDD3Q9Y3P4 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 OFD1P17-201ENST00000437639 3018 ntBASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 AC017078.1-201ENST00000416146 368 ntBASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 AL713922.1-201ENST00000416477 747 ntBASIC6□□□□□ -1.45
RHBDD3Q9Y3P4 ZBTB8OSP2-201ENST00000423890 504 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms