Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC8.29□□□□□ -1.08
HMG20BQ9P0W2 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
HMG20BQ9P0W2 AC131009.3-201ENST00000621809 287 ntBASIC8.29□□□□□ -1.08
HMG20BQ9P0W2 MKI67P1-201ENST00000604297 1460 ntBASIC8.29□□□□□ -1.08
HMG20BQ9P0W2 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
HMG20BQ9P0W2 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
HMG20BQ9P0W2 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
HMG20BQ9P0W2 OR5M2P-202ENST00000641241 4242 ntBASIC8.29□□□□□ -1.08
HMG20BQ9P0W2 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
HMG20BQ9P0W2 MAPK10-323ENST00000641493 3207 ntBASIC8.29□□□□□ -1.08
HMG20BQ9P0W2 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
HMG20BQ9P0W2 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 AC005831.1-201ENST00000624384 1697 ntBASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 AC010132.4-201ENST00000569883 1368 ntBASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 SNORA70.3-201ENST00000365075 132 ntBASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 SNORA7A-201ENST00000384765 139 ntBASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 RN7SKP196-201ENST00000516267 345 ntBASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 HNRNPA1P74-201ENST00000560782 835 ntBASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 RPL29P33-201ENST00000587474 316 ntBASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 AC020765.1-201ENST00000604296 328 ntBASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 AC015819.1-201ENST00000613588 663 ntBASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 ASNSP6-201ENST00000592770 1618 ntBASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 AC092111.1-201ENST00000618256 3358 ntBASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
HMG20BQ9P0W2 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
HMG20BQ9P0W2 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
HMG20BQ9P0W2 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
HMG20BQ9P0W2 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 RN7SKP184-201ENST00000362348 333 ntBASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 SNORD94-201ENST00000386037 137 ntBASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 RNA5SP474-201ENST00000391234 90 ntBASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 UBBP1-201ENST00000392399 473 ntBASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 RPL12P23-201ENST00000405880 490 ntBASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 Z82198.3-201ENST00000421145 199 ntBASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 AL596268.1-201ENST00000427910 1048 ntBASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 RPEP4-201ENST00000437636 602 ntBASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 VNN3-210ENST00000450865 596 ntTSL 4 BASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 AL034369.1-201ENST00000453808 477 ntBASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 AC099340.1-201ENST00000475247 599 ntBASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 AC021220.1-201ENST00000507445 630 ntBASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 RNA5SP318-201ENST00000516352 92 ntBASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 DIMT1P1-201ENST00000603970 763 ntBASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 AC005514.1-201ENST00000623521 208 ntBASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 CLUHP10-201ENST00000631979 980 ntBASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 RBPJP6-201ENST00000411556 1431 ntBASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 Z82209.2-201ENST00000623410 2012 ntBASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 AL451064.2-201ENST00000623514 1654 ntBASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
HMG20BQ9P0W2 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
HMG20BQ9P0W2 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
HMG20BQ9P0W2 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
HMG20BQ9P0W2 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
HMG20BQ9P0W2 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms