Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SNX18Q96RF0 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.53□□□□□ -1.36
SNX18Q96RF0 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SNX18Q96RF0 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SNX18Q96RF0 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
SNX18Q96RF0 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.52□□□□□ -1.37
SNX18Q96RF0 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
SNX18Q96RF0 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SNX18Q96RF0 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
SNX18Q96RF0 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SNX18Q96RF0 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
SNX18Q96RF0 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
SNX18Q96RF0 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SNX18Q96RF0 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
SNX18Q96RF0 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.52□□□□□ -1.37
SNX18Q96RF0 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SNX18Q96RF0 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SNX18Q96RF0 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.52□□□□□ -1.37
SNX18Q96RF0 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
SNX18Q96RF0 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SNX18Q96RF0 RNA5SP238-201ENST00000365464 120 ntBASIC6.52□□□□□ -1.37
SNX18Q96RF0 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.52□□□□□ -1.37
SNX18Q96RF0 RPL12P10-201ENST00000413498 498 ntBASIC6.52□□□□□ -1.37
SNX18Q96RF0 AC093107.1-201ENST00000422772 609 ntBASIC6.52□□□□□ -1.37
SNX18Q96RF0 PPIL1P1-201ENST00000423936 499 ntBASIC6.52□□□□□ -1.37
SNX18Q96RF0 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SNX18Q96RF0 CR391992.1-201ENST00000438601 394 ntBASIC6.52□□□□□ -1.37
SNX18Q96RF0 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SNX18Q96RF0 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC6.52□□□□□ -1.37
SNX18Q96RF0 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC6.52□□□□□ -1.37
SNX18Q96RF0 PSPC1P2-201ENST00000455130 225 ntBASIC6.52□□□□□ -1.37
SNX18Q96RF0 MTCYBP14-201ENST00000457471 715 ntBASIC6.52□□□□□ -1.37
SNX18Q96RF0 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC6.52□□□□□ -1.37
SNX18Q96RF0 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC6.52□□□□□ -1.37
SNX18Q96RF0 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC6.52□□□□□ -1.37
SNX18Q96RF0 PGBD4P1-201ENST00000473644 407 ntBASIC6.52□□□□□ -1.37
SNX18Q96RF0 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC6.52□□□□□ -1.37
SNX18Q96RF0 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC6.52□□□□□ -1.37
SNX18Q96RF0 AC117383.2-201ENST00000514722 322 ntBASIC6.52□□□□□ -1.37
SNX18Q96RF0 SNORA70.17-201ENST00000516449 133 ntBASIC6.52□□□□□ -1.37
SNX18Q96RF0 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.52□□□□□ -1.37
SNX18Q96RF0 ST13P6-201ENST00000522430 1102 ntBASIC6.52□□□□□ -1.37
SNX18Q96RF0 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC6.52□□□□□ -1.37
SNX18Q96RF0 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.52□□□□□ -1.37
SNX18Q96RF0 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC6.52□□□□□ -1.37
SNX18Q96RF0 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC6.52□□□□□ -1.37
SNX18Q96RF0 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
SNX18Q96RF0 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC6.52□□□□□ -1.37
SNX18Q96RF0 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC6.52□□□□□ -1.37
SNX18Q96RF0 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC6.52□□□□□ -1.37
SNX18Q96RF0 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC6.52□□□□□ -1.37
SNX18Q96RF0 MYL6-211ENST00000548580 528 ntTSL 2 BASIC6.52□□□□□ -1.37
SNX18Q96RF0 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC6.52□□□□□ -1.37
SNX18Q96RF0 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.52□□□□□ -1.37
SNX18Q96RF0 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC6.52□□□□□ -1.37
SNX18Q96RF0 CCDC58P1-201ENST00000578567 430 ntBASIC6.52□□□□□ -1.37
SNX18Q96RF0 RN7SL697P-201ENST00000582484 299 ntBASIC6.52□□□□□ -1.37
SNX18Q96RF0 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC6.52□□□□□ -1.37
SNX18Q96RF0 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC6.52□□□□□ -1.37
SNX18Q96RF0 AC020915.5-201ENST00000596836 964 ntBASIC6.52□□□□□ -1.37
SNX18Q96RF0 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC6.52□□□□□ -1.37
SNX18Q96RF0 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC6.52□□□□□ -1.37
SNX18Q96RF0 AL109936.2-201ENST00000605350 650 ntBASIC6.52□□□□□ -1.37
SNX18Q96RF0 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.52□□□□□ -1.37
SNX18Q96RF0 AC008833.1-201ENST00000611633 691 ntBASIC6.52□□□□□ -1.37
SNX18Q96RF0 AC023310.4-201ENST00000613130 650 ntBASIC6.52□□□□□ -1.37
SNX18Q96RF0 AC006249.1-201ENST00000621223 471 ntBASIC6.52□□□□□ -1.37
SNX18Q96RF0 AC087893.2-201ENST00000623272 255 ntBASIC6.52□□□□□ -1.37
SNX18Q96RF0 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SNX18Q96RF0 MTND4P21-201ENST00000453886 1357 ntBASIC6.52□□□□□ -1.37
SNX18Q96RF0 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
SNX18Q96RF0 AC018765.1-201ENST00000623357 3446 ntBASIC6.52□□□□□ -1.37
SNX18Q96RF0 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.52□□□□□ -1.37
SNX18Q96RF0 AP002833.3-201ENST00000625075 2265 ntBASIC6.52□□□□□ -1.37
SNX18Q96RF0 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
SNX18Q96RF0 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SNX18Q96RF0 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
SNX18Q96RF0 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SNX18Q96RF0 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SNX18Q96RF0 ZNF402P-201ENST00000404435 3100 ntBASIC6.52□□□□□ -1.37
SNX18Q96RF0 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.52□□□□□ -1.37
SNX18Q96RF0 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SNX18Q96RF0 AC132219.2-201ENST00000624416 2327 ntBASIC6.51□□□□□ -1.37
SNX18Q96RF0 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SNX18Q96RF0 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SNX18Q96RF0 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
SNX18Q96RF0 AKAP17BP-201ENST00000431706 2719 ntBASIC6.51□□□□□ -1.37
SNX18Q96RF0 VEZF1P1-201ENST00000423931 1541 ntBASIC6.51□□□□□ -1.37
SNX18Q96RF0 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC6.51□□□□□ -1.37
SNX18Q96RF0 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
SNX18Q96RF0 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SNX18Q96RF0 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.51□□□□□ -1.37
SNX18Q96RF0 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SNX18Q96RF0 AC090643.1-201ENST00000623600 3100 ntBASIC6.51□□□□□ -1.37
SNX18Q96RF0 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC6.51□□□□□ -1.37
SNX18Q96RF0 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SNX18Q96RF0 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
SNX18Q96RF0 RN7SKP257-201ENST00000364525 309 ntBASIC6.51□□□□□ -1.37
SNX18Q96RF0 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
SNX18Q96RF0 RNU6-883P-201ENST00000384597 107 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms