Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
C9orf40Q8IXQ3 AC093278.2-201ENST00000564956 2485 ntBASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 RNA5SP65-201ENST00000363166 119 ntBASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 AC092634.1-201ENST00000366505 199 ntBASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 RPL31-202ENST00000409000 641 ntTSL 2 BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 SPATA20P1-201ENST00000423089 438 ntBASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 PSMD8P1-201ENST00000436275 769 ntBASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 CRYGGP-201ENST00000443337 145 ntBASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 AL121578.2-201ENST00000448797 447 ntBASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 PPIAP32-201ENST00000449940 472 ntBASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 RN7SL70P-201ENST00000478322 302 ntBASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 AC095057.1-201ENST00000507583 168 ntBASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 AC026774.2-201ENST00000513990 1098 ntBASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 AC011352.2-201ENST00000514574 1016 ntBASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 OR5BK1P-201ENST00000550421 823 ntBASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 HMGN1P26-201ENST00000558737 303 ntBASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 AC091768.1-201ENST00000609258 930 ntBASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 AC127071.2-201ENST00000623293 527 ntBASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 AC027559.1-201ENST00000636288 271 ntBASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 TMEM75-201ENST00000624314 2165 ntBASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 Z97989.1-201ENST00000531702 2421 ntBASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
C9orf40Q8IXQ3 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC6.27□□□□□ -1.4
C9orf40Q8IXQ3 CCDC150P1-201ENST00000537123 2215 ntBASIC6.27□□□□□ -1.4
C9orf40Q8IXQ3 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 AC092111.1-201ENST00000618256 3358 ntBASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 RNU1-55P-201ENST00000365510 158 ntBASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 UBBP1-201ENST00000392399 473 ntBASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 ARSFP1-201ENST00000398758 477 ntBASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 AL590635.1-201ENST00000406314 586 ntBASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 AC006509.1-201ENST00000420788 634 ntBASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 AL022324.2-201ENST00000434827 780 ntBASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms