Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RPL7AP71-201ENST00000451120 739 ntBASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 BZW1P1-201ENST00000454901 1240 ntBASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 AL096803.1-201ENST00000456921 1021 ntBASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 MTND2P31-201ENST00000512602 616 ntBASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 MTCYBP44-201ENST00000514835 823 ntBASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 RN7SKP242-201ENST00000515967 289 ntBASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 IGLC4-201ENST00000517690 248 ntBASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 OR4A13P-201ENST00000529316 942 ntBASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 TRAV11-201ENST00000539512 339 ntBASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 PPIAP6-201ENST00000557078 499 ntBASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 UGT2B27P-201ENST00000505092 1620 ntBASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 AC079949.2-201ENST00000617117 2933 ntBASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC6.75□□□□□ -1.33
ZNF549Q6P9A3 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 DLEU2L-201ENST00000371086 3555 ntBASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 AC010168.2-201ENST00000562691 5428 ntBASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 TRIM53CP-201ENST00000531490 1354 ntBASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 SALL4P7-201ENST00000555779 3120 ntBASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 PPIAP26-201ENST00000377951 522 ntBASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 AC024937.2-201ENST00000411669 1242 ntBASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 PPIAP23-201ENST00000420099 497 ntBASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 ELOBP4-201ENST00000423418 296 ntBASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 FDPSP6-201ENST00000425091 512 ntBASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 SEC63P1-201ENST00000425785 1258 ntBASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 PHB2P1-201ENST00000434943 890 ntBASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 RPL23AP28-201ENST00000448062 470 ntBASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 RN7SL382P-201ENST00000482631 282 ntBASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 AC025271.1-201ENST00000485045 429 ntBASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 AC122713.1-201ENST00000518368 1015 ntBASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 AP001994.1-201ENST00000527539 826 ntBASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 AC026458.1-201ENST00000564330 438 ntBASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 AC004232.1-201ENST00000571388 208 ntBASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 AC073857.1-201ENST00000625082 1054 ntBASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 OR2A3P-202ENST00000641249 1776 ntBASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.74□□□□□ -1.33
ZNF549Q6P9A3 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms