Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 VN1R53P-201ENST00000429536 957 ntBASIC6.53□□□□□ -1.36
SUMO3P55854 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC6.53□□□□□ -1.36
SUMO3P55854 MORF4L1P5-201ENST00000433352 961 ntBASIC6.53□□□□□ -1.36
SUMO3P55854 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC6.53□□□□□ -1.36
SUMO3P55854 MTND2P21-201ENST00000436242 1042 ntBASIC6.53□□□□□ -1.36
SUMO3P55854 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC6.53□□□□□ -1.36
SUMO3P55854 ELOCP3-201ENST00000439303 348 ntBASIC6.53□□□□□ -1.36
SUMO3P55854 PRKAR1AP1-201ENST00000441422 1162 ntBASIC6.53□□□□□ -1.36
SUMO3P55854 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC6.53□□□□□ -1.36
SUMO3P55854 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.53□□□□□ -1.36
SUMO3P55854 AC092421.1-201ENST00000448148 418 ntBASIC6.53□□□□□ -1.36
SUMO3P55854 BUD31P2-201ENST00000449374 300 ntBASIC6.53□□□□□ -1.36
SUMO3P55854 RN7SL563P-201ENST00000481233 298 ntBASIC6.53□□□□□ -1.36
SUMO3P55854 OR9N1P-202ENST00000494289 481 ntBASIC6.53□□□□□ -1.36
SUMO3P55854 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC6.53□□□□□ -1.36
SUMO3P55854 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC6.53□□□□□ -1.36
SUMO3P55854 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC6.53□□□□□ -1.36
SUMO3P55854 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.53□□□□□ -1.36
SUMO3P55854 AP003084.1-201ENST00000524828 742 ntBASIC6.53□□□□□ -1.36
SUMO3P55854 NDUFA3P2-201ENST00000531434 232 ntBASIC6.53□□□□□ -1.36
SUMO3P55854 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC6.53□□□□□ -1.36
SUMO3P55854 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC6.53□□□□□ -1.36
SUMO3P55854 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC6.53□□□□□ -1.36
SUMO3P55854 EXOSC3P2-201ENST00000594464 497 ntBASIC6.53□□□□□ -1.36
SUMO3P55854 ZNF92P2-201ENST00000600543 1059 ntBASIC6.53□□□□□ -1.36
SUMO3P55854 FRG2MP-201ENST00000613317 856 ntBASIC6.53□□□□□ -1.36
SUMO3P55854 AC025016.1-201ENST00000616746 682 ntBASIC6.53□□□□□ -1.36
SUMO3P55854 MIR6736-201ENST00000616799 59 ntBASIC6.53□□□□□ -1.36
SUMO3P55854 MIR6829-201ENST00000620375 67 ntBASIC6.53□□□□□ -1.36
SUMO3P55854 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC6.53□□□□□ -1.36
SUMO3P55854 AP000943.4-201ENST00000622912 357 ntBASIC6.53□□□□□ -1.36
SUMO3P55854 AC097460.3-201ENST00000623099 442 ntBASIC6.53□□□□□ -1.36
SUMO3P55854 AL034408.1-201ENST00000637712 664 ntBASIC6.53□□□□□ -1.36
SUMO3P55854 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SUMO3P55854 AL096816.1-201ENST00000623300 2920 ntBASIC6.53□□□□□ -1.36
SUMO3P55854 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC6.53□□□□□ -1.36
SUMO3P55854 CDY7P-201ENST00000429883 1604 ntBASIC6.53□□□□□ -1.36
SUMO3P55854 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC6.53□□□□□ -1.36
SUMO3P55854 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SUMO3P55854 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SUMO3P55854 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.53□□□□□ -1.36
SUMO3P55854 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SUMO3P55854 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.53□□□□□ -1.36
SUMO3P55854 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SUMO3P55854 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC6.53□□□□□ -1.36
SUMO3P55854 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
SUMO3P55854 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC6.52□□□□□ -1.37
SUMO3P55854 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
SUMO3P55854 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC6.52□□□□□ -1.37
SUMO3P55854 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
SUMO3P55854 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
SUMO3P55854 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SUMO3P55854 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SUMO3P55854 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC6.52□□□□□ -1.37
SUMO3P55854 ZNF710-AS1-202ENST00000620791 2133 ntBASIC6.52□□□□□ -1.37
SUMO3P55854 HSPA8P19-201ENST00000505359 1517 ntBASIC6.52□□□□□ -1.37
SUMO3P55854 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SUMO3P55854 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
SUMO3P55854 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SUMO3P55854 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC6.52□□□□□ -1.37
SUMO3P55854 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SUMO3P55854 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC6.52□□□□□ -1.37
SUMO3P55854 U3.14-201ENST00000365363 227 ntBASIC6.52□□□□□ -1.37
SUMO3P55854 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SUMO3P55854 AC006511.2-201ENST00000388966 660 ntBASIC6.52□□□□□ -1.37
SUMO3P55854 RPS3AP5-201ENST00000389400 821 ntBASIC6.52□□□□□ -1.37
SUMO3P55854 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC6.52□□□□□ -1.37
SUMO3P55854 AL359885.1-201ENST00000415786 903 ntBASIC6.52□□□□□ -1.37
SUMO3P55854 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.52□□□□□ -1.37
SUMO3P55854 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC6.52□□□□□ -1.37
SUMO3P55854 MARK2P12-201ENST00000420129 585 ntBASIC6.52□□□□□ -1.37
SUMO3P55854 CLIC4P3-201ENST00000422221 752 ntBASIC6.52□□□□□ -1.37
SUMO3P55854 HCG25-217ENST00000422366 702 ntTSL 3 BASIC6.52□□□□□ -1.37
SUMO3P55854 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC6.52□□□□□ -1.37
SUMO3P55854 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.52□□□□□ -1.37
SUMO3P55854 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC6.52□□□□□ -1.37
SUMO3P55854 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC6.52□□□□□ -1.37
SUMO3P55854 AL606490.7-201ENST00000433136 191 ntBASIC6.52□□□□□ -1.37
SUMO3P55854 AL450384.2-202ENST00000436485 656 ntTSL 3 BASIC6.52□□□□□ -1.37
SUMO3P55854 CYCSP44-201ENST00000448560 313 ntBASIC6.52□□□□□ -1.37
SUMO3P55854 PRDX1P1-201ENST00000449329 596 ntBASIC6.52□□□□□ -1.37
SUMO3P55854 SNORA35.1-201ENST00000458908 128 ntBASIC6.52□□□□□ -1.37
SUMO3P55854 SNORA81.1-201ENST00000458922 177 ntBASIC6.52□□□□□ -1.37
SUMO3P55854 PABPC1P10-201ENST00000464731 381 ntBASIC6.52□□□□□ -1.37
SUMO3P55854 C1GALT1P2-201ENST00000510813 1104 ntBASIC6.52□□□□□ -1.37
SUMO3P55854 AC016550.3-201ENST00000515706 767 ntBASIC6.52□□□□□ -1.37
SUMO3P55854 RNU6-1102P-201ENST00000516149 96 ntBASIC6.52□□□□□ -1.37
SUMO3P55854 SNORA76.2-201ENST00000517095 137 ntBASIC6.52□□□□□ -1.37
SUMO3P55854 AC103833.1-201ENST00000517442 172 ntBASIC6.52□□□□□ -1.37
SUMO3P55854 OR7E154P-201ENST00000525174 932 ntBASIC6.52□□□□□ -1.37
SUMO3P55854 OR5M4P-201ENST00000529436 925 ntBASIC6.52□□□□□ -1.37
SUMO3P55854 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SUMO3P55854 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC6.52□□□□□ -1.37
SUMO3P55854 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC6.52□□□□□ -1.37
SUMO3P55854 MIR4685-201ENST00000578185 69 ntBASIC6.52□□□□□ -1.37
SUMO3P55854 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.52□□□□□ -1.37
SUMO3P55854 AC012213.4-201ENST00000606457 354 ntBASIC6.52□□□□□ -1.37
SUMO3P55854 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.52□□□□□ -1.37
SUMO3P55854 AC018558.4-201ENST00000622153 281 ntBASIC6.52□□□□□ -1.37
SUMO3P55854 AC023510.2-201ENST00000622162 746 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms