Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.04□□□□□ -1.44
RHBDD3Q9Y3P4 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 AP005139.1-201ENST00000580702 1647 ntBASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 NEK2P4-201ENST00000425793 1329 ntBASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 AL512310.3-201ENST00000547023 1335 ntBASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 PWRN1-212ENST00000569908 1435 ntBASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 AC005261.2-201ENST00000593427 4258 ntBASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 SNORA70.5-201ENST00000365519 135 ntBASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 RPS3AP5-201ENST00000389400 821 ntBASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 RN7SKP39-201ENST00000410773 322 ntBASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 RPL36P18-201ENST00000419316 318 ntBASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 AL604028.2-201ENST00000437848 788 ntBASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 PRKAR1AP1-201ENST00000441422 1162 ntBASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 AC091982.1-202ENST00000473923 343 ntBASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 MYL6P4-201ENST00000477911 453 ntBASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 ANK3-213ENST00000486349 493 ntTSL 2 BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 MRPL49P1-201ENST00000505951 535 ntBASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 AC253576.1-201ENST00000511645 1156 ntBASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 RNA5SP518-201ENST00000515957 119 ntBASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 SCARNA6-201ENST00000515982 265 ntBASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 AP000662.1-201ENST00000530952 487 ntBASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 OR7E161P-201ENST00000533722 967 ntBASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 AC079866.1-201ENST00000534985 1220 ntBASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 ACTG1P15-201ENST00000570019 1063 ntBASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 AC024614.1-201ENST00000577546 307 ntBASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 MIR5095-201ENST00000578844 88 ntBASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 OOSP1P2-201ENST00000579644 351 ntBASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 AC005070.2-201ENST00000604391 260 ntBASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 AC012640.3-201ENST00000607847 430 ntBASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 pRNA.9-201ENST00000618609 89 ntBASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 AC120057.5-201ENST00000623840 154 ntBASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 FKBP1AP4-201ENST00000631775 336 ntBASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 AC011471.4-201ENST00000638271 216 ntBASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 JAML-213ENST00000640745 951 ntTSL 5 BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 DLD-205ENST00000440410 1993 ntTSL 2 BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 MAPK10-379ENST00000642013 1385 ntBASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 AL078595.2-201ENST00000605309 1780 ntBASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
RHBDD3Q9Y3P4 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
RHBDD3Q9Y3P4 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.02□□□□□ -1.44
RHBDD3Q9Y3P4 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 RPL24P4-201ENST00000326586 421 ntBASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 FTLP17-201ENST00000432567 525 ntBASIC6.02□□□□□ -1.45
RHBDD3Q9Y3P4 AL450384.2-202ENST00000436485 656 ntTSL 3 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms