Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC040174.2-201ENST00000602701 465 ntBASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 AL121809.2-201ENST00000613169 341 ntBASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 AC135050.6-202ENST00000613584 392 ntBASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 AC091544.5-201ENST00000620192 3815 ntBASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 UGT2B27P-201ENST00000505092 1620 ntBASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
AMBRA1Q9C0C7 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 RNA5SP448-201ENST00000363151 111 ntBASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 RNA5SP238-201ENST00000365464 120 ntBASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 MIR620-201ENST00000385232 95 ntBASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 GAPDHP73-201ENST00000423411 1007 ntBASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 AL691517.1-201ENST00000440833 1235 ntBASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 RN7SL308P-201ENST00000464971 297 ntBASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 AC022730.2-201ENST00000465359 452 ntBASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 SEPT7P6-201ENST00000469999 1143 ntBASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 AC008967.1-201ENST00000504843 163 ntBASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 AC008417.1-201ENST00000510014 565 ntBASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 AC018541.1-201ENST00000517706 764 ntTSL 3 BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 AC021733.2-201ENST00000518830 497 ntBASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 SLC25A51P2-201ENST00000535708 889 ntBASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 OR7E94P-202ENST00000601375 790 ntBASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 RPS28P1-201ENST00000604589 187 ntBASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 PPATP2-201ENST00000605635 508 ntBASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 MIR6883-201ENST00000614952 78 ntBASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 uc_338.21-201ENST00000622458 147 ntBASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 AC090772.4-201ENST00000623599 362 ntBASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 ASNSP6-201ENST00000592770 1618 ntBASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 MTND4P9-201ENST00000507819 1346 ntBASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 TET1P1-201ENST00000426627 2301 ntBASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
AMBRA1Q9C0C7 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 AL121949.2-201ENST00000403446 1548 ntBASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 AC110597.1-201ENST00000562669 3176 ntBASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC6.66□□□□□ -1.34
AMBRA1Q9C0C7 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms