Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CXCL1P09341 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
CXCL1P09341 AC020658.2-201ENST00000559030 4020 ntBASIC5.2□□□□□ -1.58
CXCL1P09341 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.2□□□□□ -1.58
CXCL1P09341 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CXCL1P09341 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CXCL1P09341 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CXCL1P09341 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
CXCL1P09341 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CXCL1P09341 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CXCL1P09341 AL161912.4-201ENST00000623889 2468 ntBASIC5.2□□□□□ -1.58
CXCL1P09341 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.2□□□□□ -1.58
CXCL1P09341 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CXCL1P09341 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CXCL1P09341 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CXCL1P09341 MFSD8-256ENST00000641949 1640 ntBASIC5.2□□□□□ -1.58
CXCL1P09341 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CXCL1P09341 CASC19-260ENST00000641828 2001 ntBASIC5.2□□□□□ -1.58
CXCL1P09341 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC5.2□□□□□ -1.58
CXCL1P09341 PHF5A-201ENST00000216252 1086 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CXCL1P09341 SLC25A51-201ENST00000242275 1130 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CXCL1P09341 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CXCL1P09341 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CXCL1P09341 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CXCL1P09341 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC5.2□□□□□ -1.58
CXCL1P09341 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC5.2□□□□□ -1.58
CXCL1P09341 AL358452.1-201ENST00000414995 800 ntTSL 3 BASIC5.2□□□□□ -1.58
CXCL1P09341 AL139415.1-201ENST00000424862 352 ntBASIC5.2□□□□□ -1.58
CXCL1P09341 AC092651.1-201ENST00000426110 312 ntBASIC5.2□□□□□ -1.58
CXCL1P09341 TRBV10-2-201ENST00000426318 395 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CXCL1P09341 AC079584.1-201ENST00000426716 464 ntTSL 3 BASIC5.2□□□□□ -1.58
CXCL1P09341 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CXCL1P09341 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC5.2□□□□□ -1.58
CXCL1P09341 AL590399.4-201ENST00000436561 601 ntBASIC5.2□□□□□ -1.58
CXCL1P09341 AL021939.1-201ENST00000441868 886 ntBASIC5.2□□□□□ -1.58
CXCL1P09341 RPL5P10-201ENST00000445207 894 ntBASIC5.2□□□□□ -1.58
CXCL1P09341 AC023590.1-203ENST00000449065 411 ntTSL 3 BASIC5.2□□□□□ -1.58
CXCL1P09341 AL591438.2-201ENST00000452635 691 ntBASIC5.2□□□□□ -1.58
CXCL1P09341 AL590648.1-201ENST00000456479 460 ntBASIC5.2□□□□□ -1.58
CXCL1P09341 RPSAP7-201ENST00000456871 885 ntBASIC5.2□□□□□ -1.58
CXCL1P09341 RPS26P11-201ENST00000463445 348 ntBASIC5.2□□□□□ -1.58
CXCL1P09341 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC5.2□□□□□ -1.58
CXCL1P09341 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC5.2□□□□□ -1.58
CXCL1P09341 AC114300.1-201ENST00000502347 280 ntBASIC5.2□□□□□ -1.58
CXCL1P09341 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CXCL1P09341 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CXCL1P09341 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC5.2□□□□□ -1.58
CXCL1P09341 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC5.2□□□□□ -1.58
CXCL1P09341 IGLV3-6-201ENST00000523937 250 ntBASIC5.2□□□□□ -1.58
CXCL1P09341 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC5.2□□□□□ -1.58
CXCL1P09341 AP000619.2-201ENST00000546014 969 ntBASIC5.2□□□□□ -1.58
CXCL1P09341 AC034102.7-201ENST00000550840 470 ntTSL 5 BASIC5.2□□□□□ -1.58
CXCL1P09341 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC5.2□□□□□ -1.58
CXCL1P09341 NPM1P5-201ENST00000557228 838 ntBASIC5.2□□□□□ -1.58
CXCL1P09341 OR4N3P-201ENST00000559395 818 ntBASIC5.2□□□□□ -1.58
CXCL1P09341 SPATA8-AS1-202ENST00000560888 392 ntTSL 5 BASIC5.2□□□□□ -1.58
CXCL1P09341 LINC02180-201ENST00000566439 1010 ntTSL 3 BASIC5.2□□□□□ -1.58
CXCL1P09341 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC5.2□□□□□ -1.58
CXCL1P09341 LINC01255-203ENST00000587189 591 ntTSL 4 BASIC5.2□□□□□ -1.58
CXCL1P09341 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC5.2□□□□□ -1.58
CXCL1P09341 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CXCL1P09341 AC003002.3-201ENST00000597410 521 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
CXCL1P09341 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CXCL1P09341 AC012653.2-201ENST00000621880 420 ntBASIC5.2□□□□□ -1.58
CXCL1P09341 AC135068.4-201ENST00000622949 925 ntBASIC5.2□□□□□ -1.58
CXCL1P09341 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.2□□□□□ -1.58
CXCL1P09341 AC016582.3-206ENST00000636547 207 ntBASIC5.2□□□□□ -1.58
CXCL1P09341 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
CXCL1P09341 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CXCL1P09341 ITM2A-202ENST00000434584 1698 ntTSL 2 BASIC5.2□□□□□ -1.58
CXCL1P09341 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CXCL1P09341 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
CXCL1P09341 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CXCL1P09341 CADPS-220ENST00000613879 1804 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CXCL1P09341 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CXCL1P09341 SOCS5P5-201ENST00000402732 1586 ntBASIC5.2□□□□□ -1.58
CXCL1P09341 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CXCL1P09341 AL606490.2-201ENST00000457562 1330 ntBASIC5.2□□□□□ -1.58
CXCL1P09341 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CXCL1P09341 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CXCL1P09341 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC5.2□□□□□ -1.58
CXCL1P09341 DDX50P1-201ENST00000438163 2400 ntBASIC5.19□□□□□ -1.58
CXCL1P09341 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.19□□□□□ -1.58
CXCL1P09341 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.19□□□□□ -1.58
CXCL1P09341 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CXCL1P09341 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CXCL1P09341 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.19□□□□□ -1.58
CXCL1P09341 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.19□□□□□ -1.58
CXCL1P09341 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CXCL1P09341 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CXCL1P09341 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CXCL1P09341 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CXCL1P09341 RNA5SP188-201ENST00000362916 129 ntBASIC5.19□□□□□ -1.58
CXCL1P09341 RNA5SP65-201ENST00000363166 119 ntBASIC5.19□□□□□ -1.58
CXCL1P09341 BCL2L15-202ENST00000393316 1084 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CXCL1P09341 AC113608.1-201ENST00000398740 305 ntBASIC5.19□□□□□ -1.58
CXCL1P09341 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CXCL1P09341 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CXCL1P09341 FTOP1-201ENST00000419363 861 ntBASIC5.19□□□□□ -1.58
CXCL1P09341 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms