Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RFC3P40938 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC6.41□□□□□ -1.38
RFC3P40938 AC139713.1-202ENST00000512366 460 ntBASIC6.41□□□□□ -1.38
RFC3P40938 SCARNA6-201ENST00000515982 265 ntBASIC6.41□□□□□ -1.38
RFC3P40938 IGKV2D-38-201ENST00000518423 240 ntBASIC6.41□□□□□ -1.38
RFC3P40938 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.41□□□□□ -1.38
RFC3P40938 AC021820.1-201ENST00000525564 808 ntBASIC6.41□□□□□ -1.38
RFC3P40938 RGS5-220ENST00000528689 566 ntTSL 5 BASIC6.41□□□□□ -1.38
RFC3P40938 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
RFC3P40938 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.41□□□□□ -1.38
RFC3P40938 AC079866.1-201ENST00000534985 1220 ntBASIC6.41□□□□□ -1.38
RFC3P40938 ETFBKMT-204ENST00000538391 1067 ntTSL 3 BASIC6.41□□□□□ -1.38
RFC3P40938 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.41□□□□□ -1.38
RFC3P40938 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
RFC3P40938 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.41□□□□□ -1.38
RFC3P40938 AC096708.2-201ENST00000577676 512 ntBASIC6.41□□□□□ -1.38
RFC3P40938 EIF4A3P1-201ENST00000578499 647 ntBASIC6.41□□□□□ -1.38
RFC3P40938 MIR378C-201ENST00000578683 81 ntBASIC6.41□□□□□ -1.38
RFC3P40938 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC6.41□□□□□ -1.38
RFC3P40938 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
RFC3P40938 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.41□□□□□ -1.38
RFC3P40938 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.41□□□□□ -1.38
RFC3P40938 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.41□□□□□ -1.38
RFC3P40938 AC063962.1-201ENST00000608199 521 ntBASIC6.41□□□□□ -1.38
RFC3P40938 HTR1DP1-201ENST00000616500 888 ntBASIC6.41□□□□□ -1.38
RFC3P40938 AC025287.2-201ENST00000621911 668 ntBASIC6.41□□□□□ -1.38
RFC3P40938 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
RFC3P40938 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RFC3P40938 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.41□□□□□ -1.38
RFC3P40938 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.41□□□□□ -1.38
RFC3P40938 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
RFC3P40938 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
RFC3P40938 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.41□□□□□ -1.38
RFC3P40938 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.41□□□□□ -1.38
RFC3P40938 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.41□□□□□ -1.38
RFC3P40938 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC6.41□□□□□ -1.38
RFC3P40938 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
RFC3P40938 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RFC3P40938 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
RFC3P40938 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RFC3P40938 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
RFC3P40938 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
RFC3P40938 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC6.4□□□□□ -1.38
RFC3P40938 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RFC3P40938 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
RFC3P40938 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
RFC3P40938 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RFC3P40938 AC008957.3-201ENST00000624112 2242 ntBASIC6.4□□□□□ -1.38
RFC3P40938 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RFC3P40938 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
RFC3P40938 RN7SKP205-201ENST00000410999 307 ntBASIC6.4□□□□□ -1.38
RFC3P40938 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC6.4□□□□□ -1.38
RFC3P40938 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.4□□□□□ -1.38
RFC3P40938 UQCRHP1-204ENST00000424609 274 ntBASIC6.4□□□□□ -1.38
RFC3P40938 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC6.4□□□□□ -1.38
RFC3P40938 AC018804.1-201ENST00000430381 618 ntBASIC6.4□□□□□ -1.38
RFC3P40938 RPL3P11-201ENST00000434028 1146 ntBASIC6.4□□□□□ -1.38
RFC3P40938 AL022324.2-201ENST00000434827 780 ntBASIC6.4□□□□□ -1.38
RFC3P40938 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC6.4□□□□□ -1.38
RFC3P40938 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RFC3P40938 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC6.4□□□□□ -1.38
RFC3P40938 SDHCP3-201ENST00000445371 506 ntBASIC6.4□□□□□ -1.38
RFC3P40938 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RFC3P40938 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.4□□□□□ -1.38
RFC3P40938 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC6.4□□□□□ -1.38
RFC3P40938 AC010878.1-201ENST00000456500 1047 ntBASIC6.4□□□□□ -1.38
RFC3P40938 RN7SL372P-201ENST00000461982 298 ntBASIC6.4□□□□□ -1.38
RFC3P40938 RN7SL797P-201ENST00000486314 297 ntBASIC6.4□□□□□ -1.38
RFC3P40938 RN7SL350P-201ENST00000492591 299 ntBASIC6.4□□□□□ -1.38
RFC3P40938 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.4□□□□□ -1.38
RFC3P40938 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC6.4□□□□□ -1.38
RFC3P40938 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.4□□□□□ -1.38
RFC3P40938 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.4□□□□□ -1.38
RFC3P40938 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC6.4□□□□□ -1.38
RFC3P40938 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RFC3P40938 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RFC3P40938 RN7SL66P-201ENST00000582099 264 ntBASIC6.4□□□□□ -1.38
RFC3P40938 AC024267.2-201ENST00000582737 417 ntBASIC6.4□□□□□ -1.38
RFC3P40938 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC6.4□□□□□ -1.38
RFC3P40938 AL513218.1-201ENST00000606527 391 ntBASIC6.4□□□□□ -1.38
RFC3P40938 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC6.4□□□□□ -1.38
RFC3P40938 AC005858.3-201ENST00000624756 589 ntBASIC6.4□□□□□ -1.38
RFC3P40938 AC140479.4-205ENST00000636339 820 ntBASIC6.4□□□□□ -1.38
RFC3P40938 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.4□□□□□ -1.38
RFC3P40938 AC119674.1-201ENST00000641611 1210 ntBASIC6.4□□□□□ -1.38
RFC3P40938 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
RFC3P40938 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
RFC3P40938 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
RFC3P40938 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
RFC3P40938 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
RFC3P40938 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
RFC3P40938 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
RFC3P40938 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
RFC3P40938 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
RFC3P40938 OGFOD1P1-201ENST00000447552 1592 ntBASIC6.4□□□□□ -1.39
RFC3P40938 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RFC3P40938 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RFC3P40938 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.39□□□□□ -1.39
RFC3P40938 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RFC3P40938 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms