Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC8.69□□□□□ -1.02
ERCC3P19447 AP003066.2-201ENST00000529375 555 ntBASIC8.69□□□□□ -1.02
ERCC3P19447 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC8.69□□□□□ -1.02
ERCC3P19447 AC084851.2-201ENST00000530377 364 ntBASIC8.69□□□□□ -1.02
ERCC3P19447 EGLN3P1-201ENST00000541727 720 ntBASIC8.69□□□□□ -1.02
ERCC3P19447 AC016152.1-201ENST00000548344 521 ntTSL 3 BASIC8.69□□□□□ -1.02
ERCC3P19447 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC8.69□□□□□ -1.02
ERCC3P19447 AL358332.1-201ENST00000555649 813 ntTSL 5 BASIC8.69□□□□□ -1.02
ERCC3P19447 AC025918.2-201ENST00000558683 763 ntBASIC8.69□□□□□ -1.02
ERCC3P19447 MTND3P12-201ENST00000559068 328 ntBASIC8.69□□□□□ -1.02
ERCC3P19447 ARL6IP1-204ENST00000562819 578 ntTSL 5 BASIC8.69□□□□□ -1.02
ERCC3P19447 AGGF1P5-201ENST00000567900 919 ntBASIC8.69□□□□□ -1.02
ERCC3P19447 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC8.69□□□□□ -1.02
ERCC3P19447 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC8.69□□□□□ -1.02
ERCC3P19447 AC012065.3-201ENST00000602736 439 ntBASIC8.69□□□□□ -1.02
ERCC3P19447 AC005070.2-201ENST00000604391 260 ntBASIC8.69□□□□□ -1.02
ERCC3P19447 RN7SL778P-201ENST00000607160 297 ntBASIC8.69□□□□□ -1.02
ERCC3P19447 AL136985.2-201ENST00000607372 535 ntBASIC8.69□□□□□ -1.02
ERCC3P19447 AC124016.2-201ENST00000610058 665 ntBASIC8.69□□□□□ -1.02
ERCC3P19447 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
ERCC3P19447 MIAT_exon1.1-201ENST00000617016 135 ntBASIC8.69□□□□□ -1.02
ERCC3P19447 RMST_5.1-201ENST00000618704 126 ntBASIC8.69□□□□□ -1.02
ERCC3P19447 AC021422.1-201ENST00000621212 473 ntBASIC8.69□□□□□ -1.02
ERCC3P19447 METAP1-212ENST00000625963 147 ntTSL 5 BASIC8.69□□□□□ -1.02
ERCC3P19447 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC8.69□□□□□ -1.02
ERCC3P19447 AC073488.7-201ENST00000633785 778 ntBASIC8.69□□□□□ -1.02
ERCC3P19447 AC243725.1-201ENST00000637164 436 ntBASIC8.69□□□□□ -1.02
ERCC3P19447 OR13D1-202ENST00000641530 945 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
ERCC3P19447 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
ERCC3P19447 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC8.69□□□□□ -1.02
ERCC3P19447 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
ERCC3P19447 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
ERCC3P19447 AC125232.1-201ENST00000452554 1408 ntBASIC8.69□□□□□ -1.02
ERCC3P19447 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
ERCC3P19447 Z83820.1-201ENST00000456978 1499 ntBASIC8.69□□□□□ -1.02
ERCC3P19447 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
ERCC3P19447 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC8.69□□□□□ -1.02
ERCC3P19447 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
ERCC3P19447 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
ERCC3P19447 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC8.69□□□□□ -1.02
ERCC3P19447 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC8.68□□□□□ -1.02
ERCC3P19447 AC005840.3-201ENST00000541888 1803 ntTSL 5 BASIC8.68□□□□□ -1.02
ERCC3P19447 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
ERCC3P19447 AC018992.1-201ENST00000523778 2149 ntBASIC8.68□□□□□ -1.02
ERCC3P19447 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
ERCC3P19447 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
ERCC3P19447 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
ERCC3P19447 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC8.68□□□□□ -1.02
ERCC3P19447 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
ERCC3P19447 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
ERCC3P19447 AL161891.1-201ENST00000621575 4636 ntBASIC8.68□□□□□ -1.02
ERCC3P19447 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
ERCC3P19447 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
ERCC3P19447 MUC1-205ENST00000368389 543 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
ERCC3P19447 MUC1-206ENST00000368390 804 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
ERCC3P19447 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
ERCC3P19447 MUC1-210ENST00000368398 729 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
ERCC3P19447 AC090114.1-201ENST00000393266 448 ntBASIC8.68□□□□□ -1.02
ERCC3P19447 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
ERCC3P19447 RCAN3-203ENST00000412742 667 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
ERCC3P19447 BX664727.1-201ENST00000416024 466 ntBASIC8.68□□□□□ -1.02
ERCC3P19447 MORF4L1P5-201ENST00000433352 961 ntBASIC8.68□□□□□ -1.02
ERCC3P19447 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC8.68□□□□□ -1.02
ERCC3P19447 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC8.68□□□□□ -1.02
ERCC3P19447 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
ERCC3P19447 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC8.68□□□□□ -1.02
ERCC3P19447 RRM2P4-201ENST00000441721 562 ntBASIC8.68□□□□□ -1.02
ERCC3P19447 SLAMF6P1-201ENST00000451067 602 ntBASIC8.68□□□□□ -1.02
ERCC3P19447 AC019080.2-201ENST00000453859 394 ntBASIC8.68□□□□□ -1.02
ERCC3P19447 RBBP4P1-201ENST00000502424 1276 ntBASIC8.68□□□□□ -1.02
ERCC3P19447 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC8.68□□□□□ -1.02
ERCC3P19447 AC233724.10-201ENST00000510454 409 ntBASIC8.68□□□□□ -1.02
ERCC3P19447 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC8.68□□□□□ -1.02
ERCC3P19447 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC8.68□□□□□ -1.02
ERCC3P19447 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
ERCC3P19447 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC8.68□□□□□ -1.02
ERCC3P19447 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC8.68□□□□□ -1.02
ERCC3P19447 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC8.68□□□□□ -1.02
ERCC3P19447 AC104938.1-203ENST00000561834 546 ntTSL 3 BASIC8.68□□□□□ -1.02
ERCC3P19447 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC8.68□□□□□ -1.02
ERCC3P19447 RN7SL14P-201ENST00000579715 298 ntBASIC8.68□□□□□ -1.02
ERCC3P19447 GLUD1P2-201ENST00000583339 201 ntBASIC8.68□□□□□ -1.02
ERCC3P19447 GLUD1P8-201ENST00000585063 203 ntBASIC8.68□□□□□ -1.02
ERCC3P19447 ZNF585A-205ENST00000588354 596 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
ERCC3P19447 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC8.68□□□□□ -1.02
ERCC3P19447 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC8.68□□□□□ -1.02
ERCC3P19447 AC011492.1-201ENST00000600023 315 ntBASIC8.68□□□□□ -1.02
ERCC3P19447 CUX2P1-201ENST00000606426 298 ntBASIC8.68□□□□□ -1.02
ERCC3P19447 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC8.68□□□□□ -1.02
ERCC3P19447 AC015922.4-201ENST00000612568 690 ntBASIC8.68□□□□□ -1.02
ERCC3P19447 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC8.68□□□□□ -1.02
ERCC3P19447 AL161931.1-201ENST00000612768 246 ntBASIC8.68□□□□□ -1.02
ERCC3P19447 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC8.68□□□□□ -1.02
ERCC3P19447 AL606760.4-201ENST00000617613 718 ntBASIC8.68□□□□□ -1.02
ERCC3P19447 AP000484.1-201ENST00000620067 1252 ntBASIC8.68□□□□□ -1.02
ERCC3P19447 SEPT7P7-201ENST00000420492 1301 ntBASIC8.68□□□□□ -1.02
ERCC3P19447 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
ERCC3P19447 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
ERCC3P19447 EEF1A1P22-201ENST00000559385 1380 ntBASIC8.68□□□□□ -1.02
ERCC3P19447 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms