Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 RPL24P8-201ENST00000446071 474 ntBASIC7.28□□□□□ -1.24
COL6A2P12110 RBMY3AP-201ENST00000449381 1145 ntBASIC7.28□□□□□ -1.24
COL6A2P12110 AC007000.1-201ENST00000453064 794 ntBASIC7.28□□□□□ -1.24
COL6A2P12110 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC7.28□□□□□ -1.24
COL6A2P12110 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL6A2P12110 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.28□□□□□ -1.24
COL6A2P12110 AC084878.1-201ENST00000480555 648 ntBASIC7.28□□□□□ -1.24
COL6A2P12110 TRBV8-1-201ENST00000481590 279 ntBASIC7.28□□□□□ -1.24
COL6A2P12110 AF186996.3-201ENST00000509527 964 ntBASIC7.28□□□□□ -1.24
COL6A2P12110 OR51A1P-201ENST00000511110 946 ntBASIC7.28□□□□□ -1.24
COL6A2P12110 RNU6-889P-201ENST00000517189 103 ntBASIC7.28□□□□□ -1.24
COL6A2P12110 AC120036.3-201ENST00000517826 292 ntBASIC7.28□□□□□ -1.24
COL6A2P12110 AP003385.2-201ENST00000524910 973 ntBASIC7.28□□□□□ -1.24
COL6A2P12110 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC7.28□□□□□ -1.24
COL6A2P12110 CASP5-209ENST00000531367 879 ntTSL 5 BASIC7.28□□□□□ -1.24
COL6A2P12110 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC7.28□□□□□ -1.24
COL6A2P12110 AC243972.1-201ENST00000542992 570 ntTSL 4 BASIC7.28□□□□□ -1.24
COL6A2P12110 AC091515.1-201ENST00000548110 679 ntBASIC7.28□□□□□ -1.24
COL6A2P12110 MTND2P17-201ENST00000550281 688 ntBASIC7.28□□□□□ -1.24
COL6A2P12110 MT1B-202ENST00000562399 351 ntTSL 3 BASIC7.28□□□□□ -1.24
COL6A2P12110 AC244034.2-201ENST00000562504 509 ntBASIC7.28□□□□□ -1.24
COL6A2P12110 DNM1P31-201ENST00000564149 696 ntBASIC7.28□□□□□ -1.24
COL6A2P12110 AC007611.1-202ENST00000564212 854 ntTSL 3 BASIC7.28□□□□□ -1.24
COL6A2P12110 SPINT1-AS1-204ENST00000568419 629 ntTSL 3 BASIC7.28□□□□□ -1.24
COL6A2P12110 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC7.28□□□□□ -1.24
COL6A2P12110 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC7.28□□□□□ -1.24
COL6A2P12110 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC7.28□□□□□ -1.24
COL6A2P12110 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC7.28□□□□□ -1.24
COL6A2P12110 AL049829.3-202ENST00000604278 711 ntBASIC7.28□□□□□ -1.24
COL6A2P12110 CUX2P1-201ENST00000606426 298 ntBASIC7.28□□□□□ -1.24
COL6A2P12110 AC008759.3-201ENST00000613300 508 ntBASIC7.28□□□□□ -1.24
COL6A2P12110 AC005790.1-201ENST00000619774 450 ntBASIC7.28□□□□□ -1.24
COL6A2P12110 AP000676.4-201ENST00000624659 623 ntBASIC7.28□□□□□ -1.24
COL6A2P12110 AC022743.1-201ENST00000624990 664 ntBASIC7.28□□□□□ -1.24
COL6A2P12110 METAP1-212ENST00000625963 147 ntTSL 5 BASIC7.28□□□□□ -1.24
COL6A2P12110 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL6A2P12110 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.28□□□□□ -1.24
COL6A2P12110 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
COL6A2P12110 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL6A2P12110 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.28□□□□□ -1.24
COL6A2P12110 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.28□□□□□ -1.24
COL6A2P12110 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL6A2P12110 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC7.28□□□□□ -1.24
COL6A2P12110 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
COL6A2P12110 HDAC1P1-201ENST00000455482 1445 ntBASIC7.27□□□□□ -1.24
COL6A2P12110 NUMB-231ENST00000559312 1439 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
COL6A2P12110 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL6A2P12110 AC087565.3-202ENST00000642085 1603 ntBASIC7.27□□□□□ -1.25
COL6A2P12110 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL6A2P12110 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL6A2P12110 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL6A2P12110 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL6A2P12110 SPATA31C1-201ENST00000420021 3895 ntBASIC7.27□□□□□ -1.25
COL6A2P12110 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
COL6A2P12110 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
COL6A2P12110 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
COL6A2P12110 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.27□□□□□ -1.25
COL6A2P12110 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL6A2P12110 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL6A2P12110 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL6A2P12110 AC133644.1-201ENST00000398171 937 ntBASIC7.27□□□□□ -1.25
COL6A2P12110 KRT18P52-201ENST00000404956 846 ntBASIC7.27□□□□□ -1.25
COL6A2P12110 LSM5-203ENST00000409782 649 ntTSL 5 BASIC7.27□□□□□ -1.25
COL6A2P12110 RN7SKP168-201ENST00000410910 300 ntBASIC7.27□□□□□ -1.25
COL6A2P12110 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.27□□□□□ -1.25
COL6A2P12110 GSTA6P-201ENST00000424144 582 ntBASIC7.27□□□□□ -1.25
COL6A2P12110 AC013262.1-201ENST00000426710 252 ntBASIC7.27□□□□□ -1.25
COL6A2P12110 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
COL6A2P12110 AC013410.1-201ENST00000436223 1232 ntBASIC7.27□□□□□ -1.25
COL6A2P12110 CICP10-201ENST00000439497 198 ntBASIC7.27□□□□□ -1.25
COL6A2P12110 AC074257.1-201ENST00000446340 585 ntTSL 4 BASIC7.27□□□□□ -1.25
COL6A2P12110 CEACAMP5-201ENST00000448037 961 ntBASIC7.27□□□□□ -1.25
COL6A2P12110 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC7.27□□□□□ -1.25
COL6A2P12110 RN7SL368P-201ENST00000473384 277 ntBASIC7.27□□□□□ -1.25
COL6A2P12110 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
COL6A2P12110 AC114300.1-201ENST00000502347 280 ntBASIC7.27□□□□□ -1.25
COL6A2P12110 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC7.27□□□□□ -1.25
COL6A2P12110 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC7.27□□□□□ -1.25
COL6A2P12110 RN7SKP5-201ENST00000517045 272 ntBASIC7.27□□□□□ -1.25
COL6A2P12110 DCSTAMP-203ENST00000517991 949 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
COL6A2P12110 AC011726.3-201ENST00000518031 568 ntTSL 4 BASIC7.27□□□□□ -1.25
COL6A2P12110 OR8G5-201ENST00000524943 1041 ntBASIC7.27□□□□□ -1.25
COL6A2P12110 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC7.27□□□□□ -1.25
COL6A2P12110 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC7.27□□□□□ -1.25
COL6A2P12110 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC7.27□□□□□ -1.25
COL6A2P12110 AC078929.1-201ENST00000547679 502 ntTSL 3 BASIC7.27□□□□□ -1.25
COL6A2P12110 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC7.27□□□□□ -1.25
COL6A2P12110 AC007614.3-201ENST00000564875 654 ntTSL 3 BASIC7.27□□□□□ -1.25
COL6A2P12110 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC7.27□□□□□ -1.25
COL6A2P12110 AC027281.1-201ENST00000574178 758 ntBASIC7.27□□□□□ -1.25
COL6A2P12110 AP001496.3-201ENST00000580230 913 ntBASIC7.27□□□□□ -1.25
COL6A2P12110 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC7.27□□□□□ -1.25
COL6A2P12110 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC7.27□□□□□ -1.25
COL6A2P12110 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC7.27□□□□□ -1.25
COL6A2P12110 AL133247.2-201ENST00000603236 482 ntBASIC7.27□□□□□ -1.25
COL6A2P12110 AL137190.1-201ENST00000603288 282 ntBASIC7.27□□□□□ -1.25
COL6A2P12110 Z99289.3-201ENST00000605586 594 ntBASIC7.27□□□□□ -1.25
COL6A2P12110 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC7.27□□□□□ -1.25
COL6A2P12110 AC080112.3-201ENST00000612552 880 ntBASIC7.27□□□□□ -1.25
COL6A2P12110 AC143336.1-201ENST00000614164 836 ntBASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms