Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SSX4O60224 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.35□□□□□ -1.39
SSX4O60224 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.35□□□□□ -1.39
SSX4O60224 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSX4O60224 CREM-216ENST00000429130 1476 ntTSL 5 BASIC6.35□□□□□ -1.39
SSX4O60224 AL391261.1-201ENST00000555712 1479 ntBASIC6.35□□□□□ -1.39
SSX4O60224 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SSX4O60224 AL662795.2-201ENST00000624252 3706 ntBASIC6.35□□□□□ -1.39
SSX4O60224 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSX4O60224 EEF1A1P16-201ENST00000325349 1414 ntBASIC6.35□□□□□ -1.39
SSX4O60224 AL391380.1-201ENST00000439300 1432 ntBASIC6.35□□□□□ -1.39
SSX4O60224 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC6.35□□□□□ -1.39
SSX4O60224 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SSX4O60224 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
SSX4O60224 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSX4O60224 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSX4O60224 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSX4O60224 MIPEPP2-201ENST00000422560 1819 ntBASIC6.35□□□□□ -1.39
SSX4O60224 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSX4O60224 PPIAP22-201ENST00000358455 498 ntBASIC6.35□□□□□ -1.39
SSX4O60224 U3.14-201ENST00000365363 227 ntBASIC6.35□□□□□ -1.39
SSX4O60224 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SSX4O60224 HNRNPH1P2-201ENST00000396845 1210 ntBASIC6.35□□□□□ -1.39
SSX4O60224 SNORA11D-201ENST00000408548 128 ntBASIC6.35□□□□□ -1.39
SSX4O60224 SNORA11E-201ENST00000408778 128 ntBASIC6.35□□□□□ -1.39
SSX4O60224 AL355862.1-201ENST00000412705 353 ntBASIC6.35□□□□□ -1.39
SSX4O60224 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.35□□□□□ -1.39
SSX4O60224 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC6.35□□□□□ -1.39
SSX4O60224 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC6.35□□□□□ -1.39
SSX4O60224 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SSX4O60224 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC6.35□□□□□ -1.39
SSX4O60224 FTOP1-201ENST00000419363 861 ntBASIC6.35□□□□□ -1.39
SSX4O60224 AL359633.1-201ENST00000421403 310 ntBASIC6.35□□□□□ -1.39
SSX4O60224 GSTA6P-201ENST00000424144 582 ntBASIC6.35□□□□□ -1.39
SSX4O60224 AL592114.2-201ENST00000440142 532 ntBASIC6.35□□□□□ -1.39
SSX4O60224 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.35□□□□□ -1.39
SSX4O60224 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC6.35□□□□□ -1.39
SSX4O60224 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SSX4O60224 AC068491.1-201ENST00000449539 1241 ntBASIC6.35□□□□□ -1.39
SSX4O60224 IGKV1OR2-2-201ENST00000451163 355 ntBASIC6.35□□□□□ -1.39
SSX4O60224 AC115223.1-201ENST00000466377 870 ntBASIC6.35□□□□□ -1.39
SSX4O60224 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC6.35□□□□□ -1.39
SSX4O60224 RN7SL332P-201ENST00000482163 254 ntBASIC6.35□□□□□ -1.39
SSX4O60224 AC066616.1-201ENST00000486795 413 ntBASIC6.35□□□□□ -1.39
SSX4O60224 AC117500.1-201ENST00000497352 755 ntBASIC6.35□□□□□ -1.39
SSX4O60224 AC122714.1-201ENST00000502510 459 ntBASIC6.35□□□□□ -1.39
SSX4O60224 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC6.35□□□□□ -1.39
SSX4O60224 CFI-204ENST00000510800 667 ntTSL 2 BASIC6.35□□□□□ -1.39
SSX4O60224 AC026774.2-201ENST00000513990 1098 ntBASIC6.35□□□□□ -1.39
SSX4O60224 AC022784.5-201ENST00000522241 437 ntBASIC6.35□□□□□ -1.39
SSX4O60224 HNRNPA1P71-201ENST00000559135 950 ntBASIC6.35□□□□□ -1.39
SSX4O60224 NQO1-205ENST00000561500 891 ntTSL 3 BASIC6.35□□□□□ -1.39
SSX4O60224 RN7SL131P-201ENST00000579043 256 ntBASIC6.35□□□□□ -1.39
SSX4O60224 FCGR1CP-201ENST00000579737 1127 ntBASIC6.35□□□□□ -1.39
SSX4O60224 SETP3-201ENST00000581726 813 ntBASIC6.35□□□□□ -1.39
SSX4O60224 AC061975.3-201ENST00000583209 244 ntBASIC6.35□□□□□ -1.39
SSX4O60224 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
SSX4O60224 AC012065.3-201ENST00000602736 439 ntBASIC6.35□□□□□ -1.39
SSX4O60224 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.35□□□□□ -1.39
SSX4O60224 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC6.35□□□□□ -1.39
SSX4O60224 AL591222.2-201ENST00000604443 754 ntBASIC6.35□□□□□ -1.39
SSX4O60224 AC012640.3-201ENST00000607847 430 ntBASIC6.35□□□□□ -1.39
SSX4O60224 AL161931.1-201ENST00000612768 246 ntBASIC6.35□□□□□ -1.39
SSX4O60224 AC009283.1-201ENST00000615852 645 ntBASIC6.35□□□□□ -1.39
SSX4O60224 AC022960.2-201ENST00000616300 666 ntBASIC6.35□□□□□ -1.39
SSX4O60224 AC244100.4-201ENST00000617747 388 ntBASIC6.35□□□□□ -1.39
SSX4O60224 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC6.35□□□□□ -1.39
SSX4O60224 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.35□□□□□ -1.39
SSX4O60224 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC6.35□□□□□ -1.39
SSX4O60224 CCAT2-201ENST00000630920 1752 ntBASIC6.35□□□□□ -1.39
SSX4O60224 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSX4O60224 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
SSX4O60224 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSX4O60224 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSX4O60224 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
SSX4O60224 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSX4O60224 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC6.35□□□□□ -1.39
SSX4O60224 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSX4O60224 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
SSX4O60224 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.35□□□□□ -1.39
SSX4O60224 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSX4O60224 API5P1-201ENST00000424316 1510 ntBASIC6.35□□□□□ -1.39
SSX4O60224 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSX4O60224 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSX4O60224 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
SSX4O60224 AC105114.1-201ENST00000624795 1862 ntBASIC6.34□□□□□ -1.39
SSX4O60224 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.34□□□□□ -1.39
SSX4O60224 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
SSX4O60224 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SSX4O60224 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.34□□□□□ -1.39
SSX4O60224 SNX18P3-202ENST00000565670 1750 ntBASIC6.34□□□□□ -1.39
SSX4O60224 EEF1A1P5-201ENST00000436459 1389 ntBASIC6.34□□□□□ -1.39
SSX4O60224 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.34□□□□□ -1.39
SSX4O60224 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SSX4O60224 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SSX4O60224 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
SSX4O60224 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SSX4O60224 RN7SKP63-201ENST00000363187 301 ntBASIC6.34□□□□□ -1.39
SSX4O60224 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC6.34□□□□□ -1.39
SSX4O60224 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms