Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 SCGB2A2-201ENST00000227918 505 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 RPL12-201ENST00000361436 633 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 RNA5SP378-201ENST00000363646 120 ntBASIC7.12□□□□□ -1.27
ATG4DQ86TL0 CSNK2B-202ENST00000375866 936 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 IGKV3-15-201ENST00000390252 442 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 RNA5SP185-201ENST00000390963 114 ntBASIC7.12□□□□□ -1.27
ATG4DQ86TL0 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 MTCO1P17-201ENST00000411522 491 ntBASIC7.12□□□□□ -1.27
ATG4DQ86TL0 AL161449.1-201ENST00000414531 1199 ntBASIC7.12□□□□□ -1.27
ATG4DQ86TL0 RBMY2FP-202ENST00000420346 1263 ntBASIC7.12□□□□□ -1.27
ATG4DQ86TL0 AL365203.2-201ENST00000423444 196 ntBASIC7.12□□□□□ -1.27
ATG4DQ86TL0 RPL23AP34-201ENST00000423483 410 ntBASIC7.12□□□□□ -1.27
ATG4DQ86TL0 GPN3P1-201ENST00000423883 535 ntBASIC7.12□□□□□ -1.27
ATG4DQ86TL0 FBP2P1-202ENST00000424473 530 ntBASIC7.12□□□□□ -1.27
ATG4DQ86TL0 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 FO393414.1-201ENST00000428697 1184 ntBASIC7.12□□□□□ -1.27
ATG4DQ86TL0 WWC3-AS1-201ENST00000430057 578 ntTSL 3 BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 SCP2-206ENST00000430330 938 ntTSL 2 BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 AC098826.1-201ENST00000433943 471 ntBASIC7.12□□□□□ -1.27
ATG4DQ86TL0 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 AL592182.2-201ENST00000442477 858 ntTSL 2 BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 RPL31P53-201ENST00000457065 348 ntBASIC7.12□□□□□ -1.27
ATG4DQ86TL0 ATP1B3-202ENST00000462082 837 ntTSL 3 BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 MTND2P14-201ENST00000482139 351 ntBASIC7.12□□□□□ -1.27
ATG4DQ86TL0 RPSAP52-201ENST00000489520 1144 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 HPRT1P1-201ENST00000509498 657 ntBASIC7.12□□□□□ -1.27
ATG4DQ86TL0 AC109464.2-201ENST00000510242 943 ntBASIC7.12□□□□□ -1.27
ATG4DQ86TL0 LINC00499-203ENST00000510736 587 ntTSL 5 BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 MTCO2P15-201ENST00000532655 656 ntBASIC7.12□□□□□ -1.27
ATG4DQ86TL0 WASF2-201ENST00000536657 1083 ntTSL 2 BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 AC026111.1-201ENST00000551090 1195 ntBASIC7.12□□□□□ -1.27
ATG4DQ86TL0 AC005230.1-201ENST00000555418 285 ntBASIC7.12□□□□□ -1.27
ATG4DQ86TL0 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 AC007346.2-201ENST00000564816 892 ntBASIC7.12□□□□□ -1.27
ATG4DQ86TL0 MIR548S-201ENST00000581352 82 ntBASIC7.12□□□□□ -1.27
ATG4DQ86TL0 AL121985.1-203ENST00000588034 556 ntTSL 4 BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 DTNA-220ENST00000590831 847 ntTSL 2 BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 AC079315.1-201ENST00000602952 623 ntBASIC7.12□□□□□ -1.27
ATG4DQ86TL0 YTHDF2P1-201ENST00000604759 1271 ntBASIC7.12□□□□□ -1.27
ATG4DQ86TL0 AP002802.2-201ENST00000605877 235 ntBASIC7.12□□□□□ -1.27
ATG4DQ86TL0 AP003117.2-201ENST00000606010 545 ntBASIC7.12□□□□□ -1.27
ATG4DQ86TL0 AC093673.2-201ENST00000609674 331 ntBASIC7.12□□□□□ -1.27
ATG4DQ86TL0 AC009283.1-201ENST00000615852 645 ntBASIC7.12□□□□□ -1.27
ATG4DQ86TL0 AC239809.3-218ENST00000616018 1023 ntTSL 5 BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 LZTS1-204ENST00000616228 231 ntTSL 2 BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 AC243830.3-201ENST00000616810 376 ntBASIC7.12□□□□□ -1.27
ATG4DQ86TL0 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC7.12□□□□□ -1.27
ATG4DQ86TL0 AL606760.4-201ENST00000617613 718 ntBASIC7.12□□□□□ -1.27
ATG4DQ86TL0 AC092656.1-203ENST00000624134 423 ntBASIC7.12□□□□□ -1.27
ATG4DQ86TL0 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 OR9Q1-201ENST00000335397 2488 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 MITF-203ENST00000328528 4680 ntTSL 5 BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 PIWIL2-205ENST00000611073 2864 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 RGS7-202ENST00000366563 2206 ntTSL 5 BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 RN7SKP23-201ENST00000625159 4301 ntBASIC7.12□□□□□ -1.27
ATG4DQ86TL0 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 CASP14-201ENST00000427043 3241 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
ATG4DQ86TL0 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 TFDP2-212ENST00000486111 2360 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 AC004520.1-201ENST00000608362 1413 ntBASIC7.11□□□□□ -1.27
ATG4DQ86TL0 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 SGK1-223ENST00000528577 1850 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 AC025040.2-201ENST00000558657 1852 ntBASIC7.11□□□□□ -1.27
ATG4DQ86TL0 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 TRIM53CP-201ENST00000531490 1354 ntBASIC7.11□□□□□ -1.27
ATG4DQ86TL0 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 VSIG1-201ENST00000217957 2997 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 IFNA7-201ENST00000239347 737 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms