Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.19□□□□□ -1.42
H3F3AP84243 CARSP2-201ENST00000520688 277 ntBASIC6.19□□□□□ -1.42
H3F3AP84243 AL591767.3-201ENST00000554632 525 ntBASIC6.19□□□□□ -1.42
H3F3AP84243 NQO1-205ENST00000561500 891 ntTSL 3 BASIC6.19□□□□□ -1.42
H3F3AP84243 SNORA70D-201ENST00000578836 135 ntBASIC6.19□□□□□ -1.42
H3F3AP84243 MIR4428-201ENST00000584884 73 ntBASIC6.19□□□□□ -1.42
H3F3AP84243 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
H3F3AP84243 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC6.19□□□□□ -1.42
H3F3AP84243 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.19□□□□□ -1.42
H3F3AP84243 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC6.19□□□□□ -1.42
H3F3AP84243 AL512430.4-201ENST00000603085 613 ntBASIC6.19□□□□□ -1.42
H3F3AP84243 AC017037.4-201ENST00000624526 826 ntBASIC6.19□□□□□ -1.42
H3F3AP84243 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC6.19□□□□□ -1.42
H3F3AP84243 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.19□□□□□ -1.42
H3F3AP84243 AC007938.1-201ENST00000562524 2902 ntBASIC6.19□□□□□ -1.42
H3F3AP84243 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
H3F3AP84243 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.19□□□□□ -1.42
H3F3AP84243 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.19□□□□□ -1.42
H3F3AP84243 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
H3F3AP84243 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
H3F3AP84243 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
H3F3AP84243 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
H3F3AP84243 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
H3F3AP84243 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
H3F3AP84243 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
H3F3AP84243 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
H3F3AP84243 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
H3F3AP84243 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
H3F3AP84243 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
H3F3AP84243 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
H3F3AP84243 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
H3F3AP84243 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
H3F3AP84243 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.18□□□□□ -1.42
H3F3AP84243 BRD7P6-201ENST00000431406 1860 ntBASIC6.18□□□□□ -1.42
H3F3AP84243 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC6.18□□□□□ -1.42
H3F3AP84243 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
H3F3AP84243 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
H3F3AP84243 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC6.18□□□□□ -1.42
H3F3AP84243 NPM1P14-201ENST00000343743 866 ntBASIC6.18□□□□□ -1.42
H3F3AP84243 MIR431-201ENST00000385266 114 ntBASIC6.18□□□□□ -1.42
H3F3AP84243 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
H3F3AP84243 AL139100.1-201ENST00000408001 498 ntBASIC6.18□□□□□ -1.42
H3F3AP84243 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.18□□□□□ -1.42
H3F3AP84243 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
H3F3AP84243 PUDPP2-201ENST00000431423 643 ntBASIC6.18□□□□□ -1.42
H3F3AP84243 PHB2P1-201ENST00000434943 890 ntBASIC6.18□□□□□ -1.42
H3F3AP84243 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC6.18□□□□□ -1.42
H3F3AP84243 GOT2P2-201ENST00000450663 1251 ntBASIC6.18□□□□□ -1.42
H3F3AP84243 RPL36AP55-201ENST00000454114 305 ntBASIC6.18□□□□□ -1.42
H3F3AP84243 AL096803.1-201ENST00000456921 1021 ntBASIC6.18□□□□□ -1.42
H3F3AP84243 NMNAT1P3-201ENST00000457517 888 ntBASIC6.18□□□□□ -1.42
H3F3AP84243 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
H3F3AP84243 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC6.18□□□□□ -1.42
H3F3AP84243 AC021820.1-201ENST00000525564 808 ntBASIC6.18□□□□□ -1.42
H3F3AP84243 OR9L1P-201ENST00000529493 933 ntBASIC6.18□□□□□ -1.42
H3F3AP84243 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
H3F3AP84243 AC023080.1-201ENST00000551663 931 ntBASIC6.18□□□□□ -1.42
H3F3AP84243 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC6.18□□□□□ -1.42
H3F3AP84243 RN7SL131P-201ENST00000579043 256 ntBASIC6.18□□□□□ -1.42
H3F3AP84243 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC6.18□□□□□ -1.42
H3F3AP84243 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC6.18□□□□□ -1.42
H3F3AP84243 AL078624.2-201ENST00000605063 554 ntBASIC6.18□□□□□ -1.42
H3F3AP84243 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC6.18□□□□□ -1.42
H3F3AP84243 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
H3F3AP84243 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC6.18□□□□□ -1.42
H3F3AP84243 AC140479.4-205ENST00000636339 820 ntBASIC6.18□□□□□ -1.42
H3F3AP84243 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC6.18□□□□□ -1.42
H3F3AP84243 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
H3F3AP84243 AL133243.4-201ENST00000623116 3109 ntBASIC6.18□□□□□ -1.42
H3F3AP84243 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
H3F3AP84243 AL512329.1-201ENST00000404600 1592 ntBASIC6.18□□□□□ -1.42
H3F3AP84243 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC6.18□□□□□ -1.42
H3F3AP84243 AL022323.4-201ENST00000623980 13120 ntBASIC6.18□□□□□ -1.42
H3F3AP84243 MAPK10-379ENST00000642013 1385 ntBASIC6.18□□□□□ -1.42
H3F3AP84243 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
H3F3AP84243 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
H3F3AP84243 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
H3F3AP84243 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
H3F3AP84243 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
H3F3AP84243 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
H3F3AP84243 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
H3F3AP84243 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC6.17□□□□□ -1.42
H3F3AP84243 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
H3F3AP84243 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
H3F3AP84243 MAPK10-323ENST00000641493 3207 ntBASIC6.17□□□□□ -1.42
H3F3AP84243 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
H3F3AP84243 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
H3F3AP84243 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
H3F3AP84243 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
H3F3AP84243 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC6.17□□□□□ -1.42
H3F3AP84243 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.17□□□□□ -1.42
H3F3AP84243 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.17□□□□□ -1.42
H3F3AP84243 PPIAP26-201ENST00000377951 522 ntBASIC6.17□□□□□ -1.42
H3F3AP84243 MIR27A-201ENST00000385073 78 ntBASIC6.17□□□□□ -1.42
H3F3AP84243 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
H3F3AP84243 CEACAMP5-201ENST00000448037 961 ntBASIC6.17□□□□□ -1.42
H3F3AP84243 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.17□□□□□ -1.42
H3F3AP84243 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
H3F3AP84243 RPL5P11-201ENST00000498068 893 ntBASIC6.17□□□□□ -1.42
H3F3AP84243 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms