Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AP006587.2-201ENST00000530696 493 ntBASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 PRPSAP2-217ENST00000542013 1047 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 FLJ21408-204ENST00000566854 601 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 AL109933.4-201ENST00000612111 157 ntBASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 uc_338.21-201ENST00000622458 147 ntBASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 AC087885.1-201ENST00000641910 848 ntBASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 CADPS-220ENST00000613879 1804 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 AL513523.1-201ENST00000417868 1309 ntBASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 SLC9B1P3-201ENST00000452667 1334 ntBASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 AL357556.1-201ENST00000421884 1388 ntBASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 DNAI1-201ENST00000242317 2504 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 AL391380.1-201ENST00000439300 1432 ntBASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 AL157895.1-201ENST00000451713 1404 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 AC027575.3-201ENST00000583058 2747 ntBASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.38□□□□□ -1.55
RBFOX3A6NFN3 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 COMMD6-205ENST00000406936 1628 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 RN7SKP63-201ENST00000363187 301 ntBASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 RN7SKP36-201ENST00000363997 312 ntBASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 RNU1-59P-201ENST00000364829 162 ntBASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 IMPG1-203ENST00000369963 868 ntTSL 5 BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 RN7SKP131-201ENST00000410698 301 ntBASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 TMA16P2-201ENST00000413187 601 ntBASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 METTL8P1-201ENST00000428182 611 ntBASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 KRT18P53-201ENST00000431919 117 ntBASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 AL158168.1-201ENST00000443282 357 ntTSL 3 BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 RPL24P8-201ENST00000446071 474 ntBASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 GPR141-202ENST00000447769 1270 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 OR7E102P-201ENST00000448855 1015 ntBASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 AL590648.1-201ENST00000456479 460 ntBASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 PSMA6P2-201ENST00000457574 686 ntBASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 RPL5P3-201ENST00000493817 889 ntBASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 AC140125.3-202ENST00000504362 348 ntTSL 3 BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 AC138965.1-201ENST00000509329 348 ntTSL 3 BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 ZNF726-203ENST00000525354 806 ntTSL 2 BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 AP006587.5-201ENST00000532033 739 ntBASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 AC144548.1-201ENST00000549577 324 ntBASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 AC027020.1-201ENST00000559349 632 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 AC007494.1-201ENST00000562293 760 ntBASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 AF001548.1-201ENST00000577048 550 ntTSL 4 BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 RPL23AP90-201ENST00000603820 236 ntBASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 U1.25-201ENST00000614085 162 ntBASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 U1.34-201ENST00000618578 162 ntBASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 U1.31-201ENST00000620022 160 ntBASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 AL162377.2-201ENST00000624532 337 ntBASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 AC099654.11-201ENST00000638857 294 ntBASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 TRDMT1-210ENST00000488990 1301 ntTSL 2 BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 AC093844.1-201ENST00000514910 1361 ntBASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 MSL3P1-202ENST00000440028 1468 ntBASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 MFSD8-243ENST00000641695 1455 ntBASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
RBFOX3A6NFN3 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms