Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SHC1P29353 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SHC1P29353 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.33□□□□□ -1.4
SHC1P29353 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SHC1P29353 MIR27A-201ENST00000385073 78 ntBASIC6.33□□□□□ -1.4
SHC1P29353 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SHC1P29353 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC6.33□□□□□ -1.4
SHC1P29353 AC114402.2-201ENST00000432760 643 ntBASIC6.33□□□□□ -1.4
SHC1P29353 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC6.33□□□□□ -1.4
SHC1P29353 LSM3P3-201ENST00000436601 306 ntBASIC6.33□□□□□ -1.4
SHC1P29353 AL604028.2-201ENST00000437848 788 ntBASIC6.33□□□□□ -1.4
SHC1P29353 OR7E7P-201ENST00000455678 1012 ntBASIC6.33□□□□□ -1.4
SHC1P29353 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC6.33□□□□□ -1.4
SHC1P29353 AC096743.1-201ENST00000485172 319 ntBASIC6.33□□□□□ -1.4
SHC1P29353 RPL21P42-201ENST00000488408 464 ntBASIC6.33□□□□□ -1.4
SHC1P29353 AP005202.1-201ENST00000489915 867 ntBASIC6.33□□□□□ -1.4
SHC1P29353 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC6.33□□□□□ -1.4
SHC1P29353 IGHVII-51-2-201ENST00000519778 259 ntBASIC6.33□□□□□ -1.4
SHC1P29353 AP004607.5-201ENST00000532034 217 ntBASIC6.33□□□□□ -1.4
SHC1P29353 SSU72P6-201ENST00000532644 488 ntBASIC6.33□□□□□ -1.4
SHC1P29353 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.33□□□□□ -1.4
SHC1P29353 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.33□□□□□ -1.4
SHC1P29353 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC6.33□□□□□ -1.4
SHC1P29353 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC6.33□□□□□ -1.4
SHC1P29353 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC6.33□□□□□ -1.4
SHC1P29353 MIR3159-201ENST00000584572 74 ntBASIC6.33□□□□□ -1.4
SHC1P29353 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.33□□□□□ -1.4
SHC1P29353 AC245407.2-201ENST00000614199 451 ntBASIC6.33□□□□□ -1.4
SHC1P29353 AC008626.2-201ENST00000624425 248 ntBASIC6.33□□□□□ -1.4
SHC1P29353 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC6.33□□□□□ -1.4
SHC1P29353 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC6.33□□□□□ -1.4
SHC1P29353 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.33□□□□□ -1.4
SHC1P29353 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SHC1P29353 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SHC1P29353 Z93929.1-201ENST00000418200 1475 ntBASIC6.33□□□□□ -1.4
SHC1P29353 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
SHC1P29353 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
SHC1P29353 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
SHC1P29353 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
SHC1P29353 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
SHC1P29353 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
SHC1P29353 ZNF658B-201ENST00000602828 3408 ntBASIC6.32□□□□□ -1.4
SHC1P29353 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SHC1P29353 C1D-202ENST00000407324 1379 ntTSL 3 BASIC6.32□□□□□ -1.4
SHC1P29353 CDY19P-201ENST00000411668 1613 ntBASIC6.32□□□□□ -1.4
SHC1P29353 CDY18P-201ENST00000438294 1609 ntBASIC6.32□□□□□ -1.4
SHC1P29353 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHC1P29353 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SHC1P29353 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC6.32□□□□□ -1.4
SHC1P29353 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.32□□□□□ -1.4
SHC1P29353 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SHC1P29353 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SHC1P29353 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.32□□□□□ -1.4
SHC1P29353 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHC1P29353 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
SHC1P29353 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.32□□□□□ -1.4
SHC1P29353 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHC1P29353 NPM1P14-201ENST00000343743 866 ntBASIC6.32□□□□□ -1.4
SHC1P29353 RNU6-1017P-201ENST00000363613 106 ntBASIC6.32□□□□□ -1.4
SHC1P29353 RN7SKP257-201ENST00000364525 309 ntBASIC6.32□□□□□ -1.4
SHC1P29353 RNA5SP442-201ENST00000365050 107 ntBASIC6.32□□□□□ -1.4
SHC1P29353 RNA5SP172-201ENST00000365061 118 ntBASIC6.32□□□□□ -1.4
SHC1P29353 RNA5SP53-201ENST00000391299 120 ntBASIC6.32□□□□□ -1.4
SHC1P29353 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC6.32□□□□□ -1.4
SHC1P29353 PDCL3P5-201ENST00000398028 722 ntBASIC6.32□□□□□ -1.4
SHC1P29353 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
SHC1P29353 RN7SKP148-201ENST00000410179 275 ntBASIC6.32□□□□□ -1.4
SHC1P29353 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC6.32□□□□□ -1.4
SHC1P29353 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SHC1P29353 DUTP4-201ENST00000424782 475 ntBASIC6.32□□□□□ -1.4
SHC1P29353 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.32□□□□□ -1.4
SHC1P29353 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC6.32□□□□□ -1.4
SHC1P29353 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC6.32□□□□□ -1.4
SHC1P29353 PSMA6P2-201ENST00000457574 686 ntBASIC6.32□□□□□ -1.4
SHC1P29353 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SHC1P29353 RPS14P8-201ENST00000478778 369 ntBASIC6.32□□□□□ -1.4
SHC1P29353 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
SHC1P29353 AC073648.3-201ENST00000504939 925 ntBASIC6.32□□□□□ -1.4
SHC1P29353 RPL7L1P7-201ENST00000509986 724 ntBASIC6.32□□□□□ -1.4
SHC1P29353 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC6.32□□□□□ -1.4
SHC1P29353 IGHVIII-25-1-201ENST00000522143 241 ntBASIC6.32□□□□□ -1.4
SHC1P29353 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC6.32□□□□□ -1.4
SHC1P29353 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC6.32□□□□□ -1.4
SHC1P29353 AC079866.1-201ENST00000534985 1220 ntBASIC6.32□□□□□ -1.4
SHC1P29353 AC023080.1-201ENST00000551663 931 ntBASIC6.32□□□□□ -1.4
SHC1P29353 ACTG1P15-201ENST00000570019 1063 ntBASIC6.32□□□□□ -1.4
SHC1P29353 MIR378H-201ENST00000579966 83 ntBASIC6.32□□□□□ -1.4
SHC1P29353 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC6.32□□□□□ -1.4
SHC1P29353 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.32□□□□□ -1.4
SHC1P29353 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC6.32□□□□□ -1.4
SHC1P29353 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.32□□□□□ -1.4
SHC1P29353 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.32□□□□□ -1.4
SHC1P29353 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SHC1P29353 AC117503.3-201ENST00000623811 601 ntBASIC6.32□□□□□ -1.4
SHC1P29353 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC6.32□□□□□ -1.4
SHC1P29353 AC011471.4-201ENST00000638271 216 ntBASIC6.32□□□□□ -1.4
SHC1P29353 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHC1P29353 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.32□□□□□ -1.4
SHC1P29353 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHC1P29353 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms