Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 WFDC8-201ENST00000289953 1069 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 U3.48-201ENST00000363172 216 ntBASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 RNA5SP442-201ENST00000365050 107 ntBASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 C1QTNF9B-203ENST00000382145 888 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 RPL7-203ENST00000396466 762 ntTSL 3 BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 VN1R33P-201ENST00000411800 887 ntBASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 AL354692.1-201ENST00000423044 315 ntBASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 AKR1B10P1-201ENST00000425765 942 ntBASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 UBE2V1P6-201ENST00000430840 422 ntBASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 AC000362.1-201ENST00000433725 425 ntBASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 Z85994.2-201ENST00000434327 452 ntBASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 RPL24P8-201ENST00000446071 474 ntBASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 AC015908.1-201ENST00000478739 476 ntBASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 RN7SL88P-201ENST00000480166 299 ntBASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 OR7E83P-201ENST00000511021 970 ntBASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 RNU6-415P-201ENST00000516252 97 ntBASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 OR4A13P-201ENST00000529316 942 ntBASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 OR6M3P-201ENST00000531567 700 ntBASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 AC135626.1-201ENST00000556983 435 ntBASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 AL118558.1-201ENST00000557551 566 ntTSL 3 BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 AC007611.1-202ENST00000564212 854 ntTSL 3 BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 AL161725.1-210ENST00000590240 1224 ntTSL 5 BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 BNIP3P40-201ENST00000596017 556 ntBASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 AC007262.1-201ENST00000604099 321 ntBASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 AC119674.1-209ENST00000642031 997 ntBASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 NUMB-231ENST00000559312 1439 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 AL596244.1-201ENST00000567068 3779 ntBASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 SOCS5P5-201ENST00000402732 1586 ntBASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC6.73□□□□□ -1.33
AMBRA1Q9C0C7 KARSP2-201ENST00000415696 1639 ntBASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 HNRNPH1P2-201ENST00000396845 1210 ntBASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 SULT1C4-202ENST00000409309 1045 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 MED15P9-201ENST00000424716 533 ntBASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 MTCYBP32-201ENST00000427945 1084 ntBASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 SNX18P14-201ENST00000429308 574 ntBASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 AL451074.4-201ENST00000447545 470 ntBASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 AC092421.1-201ENST00000448148 418 ntBASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 MTND3P24-201ENST00000506306 329 ntBASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 AP004607.5-201ENST00000532034 217 ntBASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 AL132640.2-202ENST00000559732 614 ntBASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 RN7SL689P-201ENST00000577215 297 ntBASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 CUX2P1-201ENST00000606426 298 ntBASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 AC135803.1-201ENST00000608748 565 ntBASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.72□□□□□ -1.33
AMBRA1Q9C0C7 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms