Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 NPM1P21-201ENST00000513394 762 ntBASIC6.88□□□□□ -1.31
VMP1Q96GC9 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC6.88□□□□□ -1.31
VMP1Q96GC9 HNRNPCP8-201ENST00000528764 888 ntBASIC6.88□□□□□ -1.31
VMP1Q96GC9 AC018523.1-201ENST00000534211 512 ntBASIC6.88□□□□□ -1.31
VMP1Q96GC9 AL132640.2-202ENST00000559732 614 ntBASIC6.88□□□□□ -1.31
VMP1Q96GC9 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC6.88□□□□□ -1.31
VMP1Q96GC9 AC091304.5-201ENST00000568969 158 ntBASIC6.88□□□□□ -1.31
VMP1Q96GC9 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.88□□□□□ -1.31
VMP1Q96GC9 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC6.88□□□□□ -1.31
VMP1Q96GC9 EXOSC3P2-201ENST00000594464 497 ntBASIC6.88□□□□□ -1.31
VMP1Q96GC9 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
VMP1Q96GC9 RN7SL778P-201ENST00000607160 297 ntBASIC6.88□□□□□ -1.31
VMP1Q96GC9 AC097381.3-201ENST00000608962 462 ntBASIC6.88□□□□□ -1.31
VMP1Q96GC9 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC6.88□□□□□ -1.31
VMP1Q96GC9 pRNA.9-201ENST00000618609 89 ntBASIC6.88□□□□□ -1.31
VMP1Q96GC9 uc_338.21-201ENST00000622458 147 ntBASIC6.88□□□□□ -1.31
VMP1Q96GC9 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.88□□□□□ -1.31
VMP1Q96GC9 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.88□□□□□ -1.31
VMP1Q96GC9 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
VMP1Q96GC9 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.88□□□□□ -1.31
VMP1Q96GC9 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
VMP1Q96GC9 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VMP1Q96GC9 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
VMP1Q96GC9 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
VMP1Q96GC9 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VMP1Q96GC9 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VMP1Q96GC9 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.88□□□□□ -1.31
VMP1Q96GC9 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC6.88□□□□□ -1.31
VMP1Q96GC9 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
VMP1Q96GC9 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
VMP1Q96GC9 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
VMP1Q96GC9 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.87□□□□□ -1.31
VMP1Q96GC9 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
VMP1Q96GC9 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
VMP1Q96GC9 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
VMP1Q96GC9 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
VMP1Q96GC9 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC6.87□□□□□ -1.31
VMP1Q96GC9 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
VMP1Q96GC9 PWRN1-212ENST00000569908 1435 ntBASIC6.87□□□□□ -1.31
VMP1Q96GC9 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.87□□□□□ -1.31
VMP1Q96GC9 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
VMP1Q96GC9 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
VMP1Q96GC9 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
VMP1Q96GC9 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
VMP1Q96GC9 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC6.87□□□□□ -1.31
VMP1Q96GC9 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
VMP1Q96GC9 SNORA68-201ENST00000384437 133 ntBASIC6.87□□□□□ -1.31
VMP1Q96GC9 SNORA3.1-201ENST00000408166 111 ntBASIC6.87□□□□□ -1.31
VMP1Q96GC9 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC6.87□□□□□ -1.31
VMP1Q96GC9 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
VMP1Q96GC9 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
VMP1Q96GC9 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC6.87□□□□□ -1.31
VMP1Q96GC9 OR52U1P-201ENST00000439752 923 ntBASIC6.87□□□□□ -1.31
VMP1Q96GC9 AL353803.3-201ENST00000444641 335 ntBASIC6.87□□□□□ -1.31
VMP1Q96GC9 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
VMP1Q96GC9 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC6.87□□□□□ -1.31
VMP1Q96GC9 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC6.87□□□□□ -1.31
VMP1Q96GC9 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC6.87□□□□□ -1.31
VMP1Q96GC9 NDUFB4P1-201ENST00000462398 381 ntBASIC6.87□□□□□ -1.31
VMP1Q96GC9 RPL5P15-201ENST00000475870 897 ntBASIC6.87□□□□□ -1.31
VMP1Q96GC9 AC084878.1-201ENST00000480555 648 ntBASIC6.87□□□□□ -1.31
VMP1Q96GC9 OR2A3P-201ENST00000493774 953 ntBASIC6.87□□□□□ -1.31
VMP1Q96GC9 RN7SKP242-201ENST00000515967 289 ntBASIC6.87□□□□□ -1.31
VMP1Q96GC9 AP001994.1-201ENST00000527539 826 ntBASIC6.87□□□□□ -1.31
VMP1Q96GC9 EGLN3P1-201ENST00000541727 720 ntBASIC6.87□□□□□ -1.31
VMP1Q96GC9 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC6.87□□□□□ -1.31
VMP1Q96GC9 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC6.87□□□□□ -1.31
VMP1Q96GC9 AC018558.5-201ENST00000565840 952 ntBASIC6.87□□□□□ -1.31
VMP1Q96GC9 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.87□□□□□ -1.31
VMP1Q96GC9 AC006116.6-201ENST00000593258 1103 ntBASIC6.87□□□□□ -1.31
VMP1Q96GC9 AC097376.1-201ENST00000602907 997 ntBASIC6.87□□□□□ -1.31
VMP1Q96GC9 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
VMP1Q96GC9 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC6.87□□□□□ -1.31
VMP1Q96GC9 AL139123.1-201ENST00000612008 430 ntBASIC6.87□□□□□ -1.31
VMP1Q96GC9 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
VMP1Q96GC9 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC6.87□□□□□ -1.31
VMP1Q96GC9 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
VMP1Q96GC9 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
VMP1Q96GC9 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
VMP1Q96GC9 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
VMP1Q96GC9 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC6.87□□□□□ -1.31
VMP1Q96GC9 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.87□□□□□ -1.31
VMP1Q96GC9 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.87□□□□□ -1.31
VMP1Q96GC9 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
VMP1Q96GC9 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC6.87□□□□□ -1.31
VMP1Q96GC9 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
VMP1Q96GC9 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.86□□□□□ -1.31
VMP1Q96GC9 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
VMP1Q96GC9 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
VMP1Q96GC9 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
VMP1Q96GC9 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
VMP1Q96GC9 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
VMP1Q96GC9 AC127537.1-201ENST00000418183 748 ntBASIC6.86□□□□□ -1.31
VMP1Q96GC9 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
VMP1Q96GC9 AF274573.1-201ENST00000430535 494 ntBASIC6.86□□□□□ -1.31
VMP1Q96GC9 RPL5P27-201ENST00000437011 881 ntBASIC6.86□□□□□ -1.31
VMP1Q96GC9 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC6.86□□□□□ -1.31
VMP1Q96GC9 RN7SL251P-201ENST00000464175 297 ntBASIC6.86□□□□□ -1.31
VMP1Q96GC9 PPP1R11P1-201ENST00000486095 376 ntBASIC6.86□□□□□ -1.31
VMP1Q96GC9 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms