Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SSX4O60224 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
SSX4O60224 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
SSX4O60224 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SSX4O60224 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SSX4O60224 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC6.4□□□□□ -1.38
SSX4O60224 AC078880.4-201ENST00000617627 1749 ntBASIC6.4□□□□□ -1.38
SSX4O60224 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SSX4O60224 AC087392.3-202ENST00000358446 1754 ntBASIC6.4□□□□□ -1.38
SSX4O60224 CUBNP3-201ENST00000457461 1784 ntBASIC6.4□□□□□ -1.38
SSX4O60224 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SSX4O60224 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
SSX4O60224 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
SSX4O60224 RNA5SP260-201ENST00000363849 111 ntBASIC6.4□□□□□ -1.38
SSX4O60224 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
SSX4O60224 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
SSX4O60224 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
SSX4O60224 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SSX4O60224 ZNF37CP-201ENST00000406795 241 ntBASIC6.4□□□□□ -1.38
SSX4O60224 SNORA81-201ENST00000408493 178 ntBASIC6.4□□□□□ -1.38
SSX4O60224 SETP22-201ENST00000412243 957 ntBASIC6.4□□□□□ -1.38
SSX4O60224 OR52N3P-201ENST00000413417 934 ntBASIC6.4□□□□□ -1.38
SSX4O60224 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.4□□□□□ -1.38
SSX4O60224 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC6.4□□□□□ -1.38
SSX4O60224 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC6.4□□□□□ -1.38
SSX4O60224 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC6.4□□□□□ -1.38
SSX4O60224 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC6.4□□□□□ -1.38
SSX4O60224 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC6.4□□□□□ -1.38
SSX4O60224 AC005550.2-201ENST00000476382 318 ntBASIC6.4□□□□□ -1.38
SSX4O60224 ANK3-213ENST00000486349 493 ntTSL 2 BASIC6.4□□□□□ -1.38
SSX4O60224 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC6.4□□□□□ -1.38
SSX4O60224 FTH1P8-201ENST00000498161 514 ntBASIC6.4□□□□□ -1.38
SSX4O60224 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC6.4□□□□□ -1.38
SSX4O60224 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC6.4□□□□□ -1.38
SSX4O60224 RN7SKP105-201ENST00000517192 314 ntBASIC6.4□□□□□ -1.38
SSX4O60224 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC6.4□□□□□ -1.38
SSX4O60224 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC6.4□□□□□ -1.38
SSX4O60224 SSU72P6-201ENST00000532644 488 ntBASIC6.4□□□□□ -1.38
SSX4O60224 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC6.4□□□□□ -1.38
SSX4O60224 AC084033.1-201ENST00000550830 633 ntBASIC6.4□□□□□ -1.38
SSX4O60224 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC6.4□□□□□ -1.38
SSX4O60224 AL358332.1-201ENST00000555649 813 ntTSL 5 BASIC6.4□□□□□ -1.38
SSX4O60224 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.4□□□□□ -1.38
SSX4O60224 UBE2CP4-201ENST00000561405 535 ntBASIC6.4□□□□□ -1.38
SSX4O60224 AC104938.1-203ENST00000561834 546 ntTSL 3 BASIC6.4□□□□□ -1.38
SSX4O60224 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC6.4□□□□□ -1.38
SSX4O60224 AL390058.1-201ENST00000603834 629 ntBASIC6.4□□□□□ -1.38
SSX4O60224 AP001554.1-201ENST00000604533 376 ntBASIC6.4□□□□□ -1.38
SSX4O60224 MIR8082-201ENST00000612488 81 ntBASIC6.4□□□□□ -1.38
SSX4O60224 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.4□□□□□ -1.38
SSX4O60224 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC6.4□□□□□ -1.38
SSX4O60224 AC007671.1-201ENST00000616957 830 ntBASIC6.4□□□□□ -1.38
SSX4O60224 AC243830.2-201ENST00000618067 630 ntBASIC6.4□□□□□ -1.38
SSX4O60224 AC002044.3-201ENST00000623314 541 ntBASIC6.4□□□□□ -1.38
SSX4O60224 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC6.4□□□□□ -1.38
SSX4O60224 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC6.4□□□□□ -1.38
SSX4O60224 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.4□□□□□ -1.38
SSX4O60224 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.39
SSX4O60224 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
SSX4O60224 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
SSX4O60224 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SSX4O60224 SF3A3P1-201ENST00000446317 1477 ntBASIC6.4□□□□□ -1.39
SSX4O60224 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
SSX4O60224 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
SSX4O60224 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSX4O60224 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.39□□□□□ -1.39
SSX4O60224 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.39□□□□□ -1.39
SSX4O60224 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSX4O60224 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSX4O60224 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSX4O60224 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSX4O60224 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSX4O60224 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSX4O60224 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SSX4O60224 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SSX4O60224 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSX4O60224 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSX4O60224 MIR555-201ENST00000384987 96 ntBASIC6.39□□□□□ -1.39
SSX4O60224 AL139100.1-201ENST00000408001 498 ntBASIC6.39□□□□□ -1.39
SSX4O60224 RN7SKP137-201ENST00000411074 307 ntBASIC6.39□□□□□ -1.39
SSX4O60224 AC004986.1-201ENST00000414855 607 ntBASIC6.39□□□□□ -1.39
SSX4O60224 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.39□□□□□ -1.39
SSX4O60224 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC6.39□□□□□ -1.39
SSX4O60224 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SSX4O60224 OR52S1P-201ENST00000427016 937 ntBASIC6.39□□□□□ -1.39
SSX4O60224 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSX4O60224 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SSX4O60224 SLAMF6P1-201ENST00000451067 602 ntBASIC6.39□□□□□ -1.39
SSX4O60224 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SSX4O60224 EIF3LP2-201ENST00000457262 807 ntBASIC6.39□□□□□ -1.39
SSX4O60224 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC6.39□□□□□ -1.39
SSX4O60224 RN7SL791P-201ENST00000467868 295 ntBASIC6.39□□□□□ -1.39
SSX4O60224 RN7SL688P-201ENST00000471754 275 ntBASIC6.39□□□□□ -1.39
SSX4O60224 AF305872.1-201ENST00000485217 471 ntBASIC6.39□□□□□ -1.39
SSX4O60224 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSX4O60224 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC6.39□□□□□ -1.39
SSX4O60224 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC6.39□□□□□ -1.39
SSX4O60224 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.39□□□□□ -1.39
SSX4O60224 AC027801.3-201ENST00000515049 698 ntBASIC6.39□□□□□ -1.39
SSX4O60224 AC021733.2-201ENST00000518830 497 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms