Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDHGA11Q9Y5H2 PTBP1P-201ENST00000554374 1601 ntBASIC19.31■□□□□ 0.68
PCDHGA11Q9Y5H2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA11Q9Y5H2 AL020996.1-203ENST00000536896 2307 ntBASIC19.31■□□□□ 0.68
PCDHGA11Q9Y5H2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
PCDHGA11Q9Y5H2 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGA11Q9Y5H2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDHGA11Q9Y5H2 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA11Q9Y5H2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA11Q9Y5H2 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHGA11Q9Y5H2 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA11Q9Y5H2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.3■□□□□ 0.68
PCDHGA11Q9Y5H2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
PCDHGA11Q9Y5H2 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA11Q9Y5H2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA11Q9Y5H2 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PCDHGA11Q9Y5H2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA11Q9Y5H2 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA11Q9Y5H2 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHGA11Q9Y5H2 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA11Q9Y5H2 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHGA11Q9Y5H2 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHGA11Q9Y5H2 RAP2CP1-201ENST00000605103 478 ntBASIC19.3■□□□□ 0.68
PCDHGA11Q9Y5H2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA11Q9Y5H2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA11Q9Y5H2 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDHGA11Q9Y5H2 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDHGA11Q9Y5H2 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA11Q9Y5H2 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA11Q9Y5H2 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGA11Q9Y5H2 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDHGA11Q9Y5H2 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGA11Q9Y5H2 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGA11Q9Y5H2 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHGA11Q9Y5H2 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHGA11Q9Y5H2 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHGA11Q9Y5H2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHGA11Q9Y5H2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGA11Q9Y5H2 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHGA11Q9Y5H2 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PCDHGA11Q9Y5H2 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGA11Q9Y5H2 KRT8P17-201ENST00000453110 1448 ntBASIC19.29■□□□□ 0.68
PCDHGA11Q9Y5H2 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGA11Q9Y5H2 LSM12P1-201ENST00000411836 588 ntBASIC19.29■□□□□ 0.68
PCDHGA11Q9Y5H2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGA11Q9Y5H2 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHGA11Q9Y5H2 C2orf69P4-201ENST00000565394 541 ntBASIC19.29■□□□□ 0.68
PCDHGA11Q9Y5H2 AC105036.2-201ENST00000569468 176 ntBASIC19.29■□□□□ 0.68
PCDHGA11Q9Y5H2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGA11Q9Y5H2 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHGA11Q9Y5H2 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGA11Q9Y5H2 KRT17P1-201ENST00000399211 1546 ntBASIC19.29■□□□□ 0.68
PCDHGA11Q9Y5H2 MKRN4P-201ENST00000444706 1521 ntBASIC19.29■□□□□ 0.68
PCDHGA11Q9Y5H2 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
PCDHGA11Q9Y5H2 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGA11Q9Y5H2 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGA11Q9Y5H2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PCDHGA11Q9Y5H2 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA11Q9Y5H2 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHGA11Q9Y5H2 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA11Q9Y5H2 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
PCDHGA11Q9Y5H2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
PCDHGA11Q9Y5H2 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA11Q9Y5H2 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA11Q9Y5H2 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA11Q9Y5H2 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA11Q9Y5H2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PCDHGA11Q9Y5H2 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA11Q9Y5H2 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHGA11Q9Y5H2 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA11Q9Y5H2 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA11Q9Y5H2 MIR663A-201ENST00000385250 93 ntBASIC19.28■□□□□ 0.68
PCDHGA11Q9Y5H2 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.28■□□□□ 0.68
PCDHGA11Q9Y5H2 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA11Q9Y5H2 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.28■□□□□ 0.68
PCDHGA11Q9Y5H2 AL031963.3-201ENST00000606441 850 ntBASIC19.28■□□□□ 0.68
PCDHGA11Q9Y5H2 AL050303.2-201ENST00000619798 666 ntBASIC19.28■□□□□ 0.68
PCDHGA11Q9Y5H2 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA11Q9Y5H2 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA11Q9Y5H2 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA11Q9Y5H2 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA11Q9Y5H2 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA11Q9Y5H2 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA11Q9Y5H2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
PCDHGA11Q9Y5H2 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
PCDHGA11Q9Y5H2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDHGA11Q9Y5H2 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA11Q9Y5H2 KRT8P20-201ENST00000423953 1409 ntBASIC19.27■□□□□ 0.68
PCDHGA11Q9Y5H2 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA11Q9Y5H2 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA11Q9Y5H2 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHGA11Q9Y5H2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA11Q9Y5H2 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDHGA11Q9Y5H2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PCDHGA11Q9Y5H2 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHGA11Q9Y5H2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PCDHGA11Q9Y5H2 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA11Q9Y5H2 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHGA11Q9Y5H2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
PCDHGA11Q9Y5H2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms