Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
FNDC3AQ9Y2H6 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
FNDC3AQ9Y2H6 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
FNDC3AQ9Y2H6 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.34■□□□□ 0.85
FNDC3AQ9Y2H6 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
FNDC3AQ9Y2H6 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
FNDC3AQ9Y2H6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.34■□□□□ 0.85
FNDC3AQ9Y2H6 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
FNDC3AQ9Y2H6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FNDC3AQ9Y2H6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FNDC3AQ9Y2H6 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
FNDC3AQ9Y2H6 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.34■□□□□ 0.85
FNDC3AQ9Y2H6 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
FNDC3AQ9Y2H6 RN7SL471P-201ENST00000580476 299 ntBASIC20.34■□□□□ 0.85
FNDC3AQ9Y2H6 Z99916.2-201ENST00000604037 246 ntBASIC20.34■□□□□ 0.85
FNDC3AQ9Y2H6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FNDC3AQ9Y2H6 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
FNDC3AQ9Y2H6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
FNDC3AQ9Y2H6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
FNDC3AQ9Y2H6 AC087633.2-202ENST00000565166 1439 ntBASIC20.34■□□□□ 0.85
FNDC3AQ9Y2H6 PCDHAC2-203ENST00000615316 3011 ntBASIC20.33■□□□□ 0.85
FNDC3AQ9Y2H6 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
FNDC3AQ9Y2H6 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
FNDC3AQ9Y2H6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.33■□□□□ 0.85
FNDC3AQ9Y2H6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
FNDC3AQ9Y2H6 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.33■□□□□ 0.85
FNDC3AQ9Y2H6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
FNDC3AQ9Y2H6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.33■□□□□ 0.85
FNDC3AQ9Y2H6 AC069544.1-201ENST00000609399 999 ntBASIC20.33■□□□□ 0.85
FNDC3AQ9Y2H6 AL356652.1-201ENST00000615962 565 ntBASIC20.33■□□□□ 0.85
FNDC3AQ9Y2H6 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
FNDC3AQ9Y2H6 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
FNDC3AQ9Y2H6 AL391422.3-201ENST00000603791 2761 ntBASIC20.33■□□□□ 0.84
FNDC3AQ9Y2H6 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.33■□□□□ 0.84
FNDC3AQ9Y2H6 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.33■□□□□ 0.84
FNDC3AQ9Y2H6 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
FNDC3AQ9Y2H6 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
FNDC3AQ9Y2H6 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FNDC3AQ9Y2H6 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
FNDC3AQ9Y2H6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.32■□□□□ 0.84
FNDC3AQ9Y2H6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FNDC3AQ9Y2H6 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.32■□□□□ 0.84
FNDC3AQ9Y2H6 PGM5P4-201ENST00000421970 445 ntBASIC20.32■□□□□ 0.84
FNDC3AQ9Y2H6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.32■□□□□ 0.84
FNDC3AQ9Y2H6 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.32■□□□□ 0.84
FNDC3AQ9Y2H6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.32■□□□□ 0.84
FNDC3AQ9Y2H6 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.32■□□□□ 0.84
FNDC3AQ9Y2H6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.32■□□□□ 0.84
FNDC3AQ9Y2H6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.32■□□□□ 0.84
FNDC3AQ9Y2H6 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
FNDC3AQ9Y2H6 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
FNDC3AQ9Y2H6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
FNDC3AQ9Y2H6 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.32■□□□□ 0.84
FNDC3AQ9Y2H6 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FNDC3AQ9Y2H6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.32■□□□□ 0.84
FNDC3AQ9Y2H6 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FNDC3AQ9Y2H6 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FNDC3AQ9Y2H6 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FNDC3AQ9Y2H6 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.32■□□□□ 0.84
FNDC3AQ9Y2H6 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.32■□□□□ 0.84
FNDC3AQ9Y2H6 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FNDC3AQ9Y2H6 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FNDC3AQ9Y2H6 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FNDC3AQ9Y2H6 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
FNDC3AQ9Y2H6 SNORA78-201ENST00000459373 127 ntBASIC20.31■□□□□ 0.84
FNDC3AQ9Y2H6 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.31■□□□□ 0.84
FNDC3AQ9Y2H6 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.31■□□□□ 0.84
FNDC3AQ9Y2H6 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
FNDC3AQ9Y2H6 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.31■□□□□ 0.84
FNDC3AQ9Y2H6 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FNDC3AQ9Y2H6 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
FNDC3AQ9Y2H6 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
FNDC3AQ9Y2H6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FNDC3AQ9Y2H6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FNDC3AQ9Y2H6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.31■□□□□ 0.84
FNDC3AQ9Y2H6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FNDC3AQ9Y2H6 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.3■□□□□ 0.84
FNDC3AQ9Y2H6 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
FNDC3AQ9Y2H6 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FNDC3AQ9Y2H6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FNDC3AQ9Y2H6 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
FNDC3AQ9Y2H6 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.3■□□□□ 0.84
FNDC3AQ9Y2H6 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FNDC3AQ9Y2H6 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FNDC3AQ9Y2H6 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FNDC3AQ9Y2H6 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
FNDC3AQ9Y2H6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.3■□□□□ 0.84
FNDC3AQ9Y2H6 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.3■□□□□ 0.84
FNDC3AQ9Y2H6 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FNDC3AQ9Y2H6 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.3■□□□□ 0.84
FNDC3AQ9Y2H6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.3■□□□□ 0.84
FNDC3AQ9Y2H6 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.3■□□□□ 0.84
FNDC3AQ9Y2H6 AC073912.3-201ENST00000624414 853 ntBASIC20.3■□□□□ 0.84
FNDC3AQ9Y2H6 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.3■□□□□ 0.84
FNDC3AQ9Y2H6 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
FNDC3AQ9Y2H6 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FNDC3AQ9Y2H6 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FNDC3AQ9Y2H6 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.3■□□□□ 0.84
FNDC3AQ9Y2H6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
FNDC3AQ9Y2H6 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms