Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC24.26■■□□□ 1.47
ZC3H4Q9UPT8 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC24.26■■□□□ 1.47
ZC3H4Q9UPT8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC24.26■■□□□ 1.47
ZC3H4Q9UPT8 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC24.26■■□□□ 1.47
ZC3H4Q9UPT8 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
ZC3H4Q9UPT8 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC24.26■■□□□ 1.47
ZC3H4Q9UPT8 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
ZC3H4Q9UPT8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ZC3H4Q9UPT8 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
ZC3H4Q9UPT8 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ZC3H4Q9UPT8 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC24.25■■□□□ 1.47
ZC3H4Q9UPT8 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ZC3H4Q9UPT8 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ZC3H4Q9UPT8 HOMER2P1-201ENST00000455653 964 ntBASIC24.25■■□□□ 1.47
ZC3H4Q9UPT8 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC24.25■■□□□ 1.47
ZC3H4Q9UPT8 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC24.25■■□□□ 1.47
ZC3H4Q9UPT8 AC116562.4-202ENST00000641738 218 ntBASIC24.25■■□□□ 1.47
ZC3H4Q9UPT8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
ZC3H4Q9UPT8 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
ZC3H4Q9UPT8 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC24.24■■□□□ 1.47
ZC3H4Q9UPT8 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC24.24■■□□□ 1.47
ZC3H4Q9UPT8 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
ZC3H4Q9UPT8 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC24.24■■□□□ 1.47
ZC3H4Q9UPT8 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
ZC3H4Q9UPT8 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
ZC3H4Q9UPT8 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ZC3H4Q9UPT8 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ZC3H4Q9UPT8 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ZC3H4Q9UPT8 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
ZC3H4Q9UPT8 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
ZC3H4Q9UPT8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC24.24■■□□□ 1.47
ZC3H4Q9UPT8 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
ZC3H4Q9UPT8 AC116407.4-201ENST00000623319 1061 ntBASIC24.24■■□□□ 1.47
ZC3H4Q9UPT8 EP400NL-214ENST00000641289 2402 ntBASIC24.24■■□□□ 1.47
ZC3H4Q9UPT8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
ZC3H4Q9UPT8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC24.24■■□□□ 1.47
ZC3H4Q9UPT8 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC24.24■■□□□ 1.47
ZC3H4Q9UPT8 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
ZC3H4Q9UPT8 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
ZC3H4Q9UPT8 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ZC3H4Q9UPT8 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
ZC3H4Q9UPT8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC24.23■■□□□ 1.47
ZC3H4Q9UPT8 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC24.23■■□□□ 1.47
ZC3H4Q9UPT8 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC24.23■■□□□ 1.47
ZC3H4Q9UPT8 AC069148.1-201ENST00000608741 768 ntBASIC24.23■■□□□ 1.47
ZC3H4Q9UPT8 AC010653.2-201ENST00000623505 997 ntBASIC24.23■■□□□ 1.47
ZC3H4Q9UPT8 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
ZC3H4Q9UPT8 FAM99A-202ENST00000538190 1989 ntBASIC24.23■■□□□ 1.47
ZC3H4Q9UPT8 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC24.22■■□□□ 1.47
ZC3H4Q9UPT8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ZC3H4Q9UPT8 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ZC3H4Q9UPT8 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC24.22■■□□□ 1.47
ZC3H4Q9UPT8 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
ZC3H4Q9UPT8 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ZC3H4Q9UPT8 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ZC3H4Q9UPT8 LINC00565-201ENST00000562710 2331 ntBASIC24.22■■□□□ 1.47
ZC3H4Q9UPT8 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ZC3H4Q9UPT8 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ZC3H4Q9UPT8 CCR12P-201ENST00000446203 998 ntBASIC24.22■■□□□ 1.47
ZC3H4Q9UPT8 AC011506.1-201ENST00000474329 610 ntBASIC24.22■■□□□ 1.47
ZC3H4Q9UPT8 SLC25A1P4-201ENST00000567977 778 ntBASIC24.22■■□□□ 1.47
ZC3H4Q9UPT8 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
ZC3H4Q9UPT8 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
ZC3H4Q9UPT8 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC24.22■■□□□ 1.47
ZC3H4Q9UPT8 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ZC3H4Q9UPT8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ZC3H4Q9UPT8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
ZC3H4Q9UPT8 STK25-234ENST00000535007 2459 ntTSL 2 BASIC24.21■■□□□ 1.47
ZC3H4Q9UPT8 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
ZC3H4Q9UPT8 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
ZC3H4Q9UPT8 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
ZC3H4Q9UPT8 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC24.21■■□□□ 1.47
ZC3H4Q9UPT8 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
ZC3H4Q9UPT8 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
ZC3H4Q9UPT8 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
ZC3H4Q9UPT8 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC24.21■■□□□ 1.47
ZC3H4Q9UPT8 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC24.21■■□□□ 1.47
ZC3H4Q9UPT8 AL031432.5-201ENST00000641059 760 ntBASIC24.21■■□□□ 1.47
ZC3H4Q9UPT8 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
ZC3H4Q9UPT8 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
ZC3H4Q9UPT8 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
ZC3H4Q9UPT8 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
ZC3H4Q9UPT8 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
ZC3H4Q9UPT8 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
ZC3H4Q9UPT8 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
ZC3H4Q9UPT8 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
ZC3H4Q9UPT8 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC24.2■■□□□ 1.46
ZC3H4Q9UPT8 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
ZC3H4Q9UPT8 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
ZC3H4Q9UPT8 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
ZC3H4Q9UPT8 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC24.19■■□□□ 1.46
ZC3H4Q9UPT8 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
ZC3H4Q9UPT8 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
ZC3H4Q9UPT8 AC004980.1-204ENST00000429707 299 ntBASIC24.19■■□□□ 1.46
ZC3H4Q9UPT8 SLC25A1P2-201ENST00000430693 912 ntBASIC24.19■■□□□ 1.46
ZC3H4Q9UPT8 DAP-202ENST00000432074 1048 ntTSL 2 BASIC24.19■■□□□ 1.46
ZC3H4Q9UPT8 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC24.19■■□□□ 1.46
ZC3H4Q9UPT8 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC24.19■■□□□ 1.46
ZC3H4Q9UPT8 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
ZC3H4Q9UPT8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC24.19■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms