Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.18■□□□□ 0.66
UBE2E3Q969T4 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.18■□□□□ 0.66
UBE2E3Q969T4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UBE2E3Q969T4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
UBE2E3Q969T4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.18■□□□□ 0.66
UBE2E3Q969T4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.18■□□□□ 0.66
UBE2E3Q969T4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBE2E3Q969T4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBE2E3Q969T4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UBE2E3Q969T4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBE2E3Q969T4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.18■□□□□ 0.66
UBE2E3Q969T4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.18■□□□□ 0.66
UBE2E3Q969T4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBE2E3Q969T4 TMEM179-206ENST00000616017 1645 ntBASIC19.18■□□□□ 0.66
UBE2E3Q969T4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBE2E3Q969T4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBE2E3Q969T4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBE2E3Q969T4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBE2E3Q969T4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBE2E3Q969T4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBE2E3Q969T4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBE2E3Q969T4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBE2E3Q969T4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBE2E3Q969T4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBE2E3Q969T4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBE2E3Q969T4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
UBE2E3Q969T4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBE2E3Q969T4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBE2E3Q969T4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBE2E3Q969T4 DUSP5P2-201ENST00000426873 1033 ntBASIC19.17■□□□□ 0.66
UBE2E3Q969T4 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.17■□□□□ 0.66
UBE2E3Q969T4 GUSBP6-202ENST00000438529 1198 ntBASIC19.17■□□□□ 0.66
UBE2E3Q969T4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.17■□□□□ 0.66
UBE2E3Q969T4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.17■□□□□ 0.66
UBE2E3Q969T4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
UBE2E3Q969T4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
UBE2E3Q969T4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBE2E3Q969T4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
UBE2E3Q969T4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE2E3Q969T4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE2E3Q969T4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE2E3Q969T4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE2E3Q969T4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
UBE2E3Q969T4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
UBE2E3Q969T4 AL390719.1-204ENST00000412397 1219 ntBASIC19.16■□□□□ 0.66
UBE2E3Q969T4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
UBE2E3Q969T4 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.16■□□□□ 0.66
UBE2E3Q969T4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.16■□□□□ 0.66
UBE2E3Q969T4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBE2E3Q969T4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.16■□□□□ 0.66
UBE2E3Q969T4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.16■□□□□ 0.66
UBE2E3Q969T4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.16■□□□□ 0.66
UBE2E3Q969T4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.16■□□□□ 0.66
UBE2E3Q969T4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE2E3Q969T4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE2E3Q969T4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.16■□□□□ 0.66
UBE2E3Q969T4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE2E3Q969T4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBE2E3Q969T4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBE2E3Q969T4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE2E3Q969T4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
UBE2E3Q969T4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.15■□□□□ 0.66
UBE2E3Q969T4 AL691432.2-201ENST00000607222 2038 ntBASIC19.15■□□□□ 0.66
UBE2E3Q969T4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE2E3Q969T4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.15■□□□□ 0.66
UBE2E3Q969T4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE2E3Q969T4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE2E3Q969T4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE2E3Q969T4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE2E3Q969T4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
UBE2E3Q969T4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
UBE2E3Q969T4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE2E3Q969T4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
UBE2E3Q969T4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.15■□□□□ 0.66
UBE2E3Q969T4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBE2E3Q969T4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
UBE2E3Q969T4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.15■□□□□ 0.66
UBE2E3Q969T4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.15■□□□□ 0.66
UBE2E3Q969T4 AC091874.3-201ENST00000512672 1195 ntBASIC19.15■□□□□ 0.66
UBE2E3Q969T4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.15■□□□□ 0.66
UBE2E3Q969T4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
UBE2E3Q969T4 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.15■□□□□ 0.66
UBE2E3Q969T4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE2E3Q969T4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
UBE2E3Q969T4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE2E3Q969T4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBE2E3Q969T4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.15■□□□□ 0.66
UBE2E3Q969T4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
UBE2E3Q969T4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.14■□□□□ 0.65
UBE2E3Q969T4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBE2E3Q969T4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
UBE2E3Q969T4 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.14■□□□□ 0.65
UBE2E3Q969T4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
UBE2E3Q969T4 AC097658.1-201ENST00000475555 843 ntBASIC19.14■□□□□ 0.65
UBE2E3Q969T4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.14■□□□□ 0.65
UBE2E3Q969T4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.14■□□□□ 0.65
UBE2E3Q969T4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.14■□□□□ 0.65
UBE2E3Q969T4 AL109923.1-201ENST00000618799 583 ntBASIC19.14■□□□□ 0.65
UBE2E3Q969T4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
UBE2E3Q969T4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms