Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
DDX60Q8IY21 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
DDX60Q8IY21 AP000525.1-201ENST00000608286 694 ntBASIC24.77■■□□□ 1.56
DDX60Q8IY21 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC24.77■■□□□ 1.56
DDX60Q8IY21 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
DDX60Q8IY21 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
DDX60Q8IY21 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC24.77■■□□□ 1.56
DDX60Q8IY21 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
DDX60Q8IY21 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
DDX60Q8IY21 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC24.76■■□□□ 1.55
DDX60Q8IY21 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC24.76■■□□□ 1.55
DDX60Q8IY21 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
DDX60Q8IY21 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
DDX60Q8IY21 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
DDX60Q8IY21 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC24.76■■□□□ 1.55
DDX60Q8IY21 KSR1P1-201ENST00000446298 240 ntBASIC24.76■■□□□ 1.55
DDX60Q8IY21 AP002982.1-201ENST00000492365 877 ntBASIC24.76■■□□□ 1.55
DDX60Q8IY21 P4HB-223ENST00000576390 439 ntTSL 4 BASIC24.76■■□□□ 1.55
DDX60Q8IY21 AC007225.1-201ENST00000566331 1836 ntBASIC24.76■■□□□ 1.55
DDX60Q8IY21 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC24.76■■□□□ 1.55
DDX60Q8IY21 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
DDX60Q8IY21 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
DDX60Q8IY21 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
DDX60Q8IY21 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
DDX60Q8IY21 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
DDX60Q8IY21 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC24.75■■□□□ 1.55
DDX60Q8IY21 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC24.75■■□□□ 1.55
DDX60Q8IY21 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC24.75■■□□□ 1.55
DDX60Q8IY21 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC24.75■■□□□ 1.55
DDX60Q8IY21 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC24.75■■□□□ 1.55
DDX60Q8IY21 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC24.75■■□□□ 1.55
DDX60Q8IY21 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
DDX60Q8IY21 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
DDX60Q8IY21 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
DDX60Q8IY21 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
DDX60Q8IY21 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC24.75■■□□□ 1.55
DDX60Q8IY21 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
DDX60Q8IY21 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC24.75■■□□□ 1.55
DDX60Q8IY21 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC24.75■■□□□ 1.55
DDX60Q8IY21 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
DDX60Q8IY21 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
DDX60Q8IY21 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
DDX60Q8IY21 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
DDX60Q8IY21 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC24.74■■□□□ 1.55
DDX60Q8IY21 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC24.74■■□□□ 1.55
DDX60Q8IY21 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC24.74■■□□□ 1.55
DDX60Q8IY21 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
DDX60Q8IY21 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
DDX60Q8IY21 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
DDX60Q8IY21 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
DDX60Q8IY21 DUT-205ENST00000558813 769 ntTSL 2 BASIC24.73■■□□□ 1.55
DDX60Q8IY21 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC24.73■■□□□ 1.55
DDX60Q8IY21 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
DDX60Q8IY21 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC24.73■■□□□ 1.55
DDX60Q8IY21 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
DDX60Q8IY21 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC24.72■■□□□ 1.55
DDX60Q8IY21 ABBA01031674.1-201ENST00000635145 728 ntBASIC24.72■■□□□ 1.55
DDX60Q8IY21 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
DDX60Q8IY21 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
DDX60Q8IY21 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
DDX60Q8IY21 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
DDX60Q8IY21 AC116351.2-201ENST00000606540 1585 ntBASIC24.72■■□□□ 1.55
DDX60Q8IY21 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
DDX60Q8IY21 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
DDX60Q8IY21 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
DDX60Q8IY21 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC24.72■■□□□ 1.55
DDX60Q8IY21 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC24.72■■□□□ 1.55
DDX60Q8IY21 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
DDX60Q8IY21 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC24.72■■□□□ 1.55
DDX60Q8IY21 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
DDX60Q8IY21 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
DDX60Q8IY21 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
DDX60Q8IY21 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
DDX60Q8IY21 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
DDX60Q8IY21 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC24.71■■□□□ 1.55
DDX60Q8IY21 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC24.71■■□□□ 1.55
DDX60Q8IY21 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC24.71■■□□□ 1.55
DDX60Q8IY21 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
DDX60Q8IY21 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
DDX60Q8IY21 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC24.71■■□□□ 1.55
DDX60Q8IY21 AC026271.3-201ENST00000571884 352 ntBASIC24.71■■□□□ 1.55
DDX60Q8IY21 AC145285.6-201ENST00000604632 637 ntBASIC24.71■■□□□ 1.55
DDX60Q8IY21 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
DDX60Q8IY21 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
DDX60Q8IY21 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
DDX60Q8IY21 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.55
DDX60Q8IY21 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
DDX60Q8IY21 MMP23A-201ENST00000234610 1017 ntBASIC24.7■■□□□ 1.54
DDX60Q8IY21 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC24.7■■□□□ 1.54
DDX60Q8IY21 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
DDX60Q8IY21 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
DDX60Q8IY21 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
DDX60Q8IY21 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
DDX60Q8IY21 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC24.7■■□□□ 1.54
DDX60Q8IY21 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC24.7■■□□□ 1.54
DDX60Q8IY21 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC24.7■■□□□ 1.54
DDX60Q8IY21 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
DDX60Q8IY21 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
DDX60Q8IY21 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
DDX60Q8IY21 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC24.69■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms