Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Commd3Q63829 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Commd3Q63829 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Commd3Q63829 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Commd3Q63829 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.41□□□□□ -0.1
Commd3Q63829 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.41□□□□□ -0.1
Commd3Q63829 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Commd3Q63829 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Commd3Q63829 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Commd3Q63829 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Commd3Q63829 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Commd3Q63829 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Commd3Q63829 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Commd3Q63829 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Commd3Q63829 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Commd3Q63829 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.4□□□□□ -0.1
Commd3Q63829 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Commd3Q63829 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.4□□□□□ -0.1
Commd3Q63829 Gm9847-201ENSMUST00000052528 599 ntBASIC14.4□□□□□ -0.1
Commd3Q63829 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Commd3Q63829 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Commd3Q63829 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Commd3Q63829 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Commd3Q63829 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Commd3Q63829 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Commd3Q63829 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Commd3Q63829 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Commd3Q63829 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Commd3Q63829 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Commd3Q63829 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Commd3Q63829 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Commd3Q63829 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Commd3Q63829 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Commd3Q63829 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Commd3Q63829 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Commd3Q63829 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Commd3Q63829 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Commd3Q63829 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Commd3Q63829 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Commd3Q63829 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.39□□□□□ -0.11
Commd3Q63829 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Commd3Q63829 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Commd3Q63829 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Commd3Q63829 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Commd3Q63829 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Commd3Q63829 Gm8493-201ENSMUST00000196881 489 ntBASIC14.39□□□□□ -0.11
Commd3Q63829 Gm40848-201ENSMUST00000221998 324 ntBASIC14.39□□□□□ -0.11
Commd3Q63829 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.39□□□□□ -0.11
Commd3Q63829 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Commd3Q63829 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Commd3Q63829 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.39□□□□□ -0.11
Commd3Q63829 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Commd3Q63829 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Commd3Q63829 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.39□□□□□ -0.11
Commd3Q63829 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Commd3Q63829 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Commd3Q63829 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Commd3Q63829 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Commd3Q63829 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Commd3Q63829 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Commd3Q63829 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Commd3Q63829 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Commd3Q63829 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Commd3Q63829 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Commd3Q63829 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Commd3Q63829 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Commd3Q63829 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Commd3Q63829 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Commd3Q63829 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Commd3Q63829 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Commd3Q63829 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Commd3Q63829 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Commd3Q63829 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Commd3Q63829 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Commd3Q63829 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Commd3Q63829 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC14.38□□□□□ -0.11
Commd3Q63829 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.38□□□□□ -0.11
Commd3Q63829 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Commd3Q63829 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Commd3Q63829 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Commd3Q63829 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Commd3Q63829 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Commd3Q63829 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Commd3Q63829 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Commd3Q63829 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Commd3Q63829 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Commd3Q63829 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Commd3Q63829 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Commd3Q63829 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.37□□□□□ -0.11
Commd3Q63829 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Commd3Q63829 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Commd3Q63829 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Commd3Q63829 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Commd3Q63829 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Commd3Q63829 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Commd3Q63829 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Commd3Q63829 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC14.37□□□□□ -0.11
Commd3Q63829 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Commd3Q63829 AC140930.3-201ENSMUST00000222935 274 ntBASIC14.37□□□□□ -0.11
Commd3Q63829 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms