Protein–RNA interactions for Protein: P53260

GTF1, Glutamyl-tRNA(Gln) amidotransferase subunit F, mitochondrial, yeastyeast

Predicted RBP Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
GTF1P53260 snR64snR64 101 nt1.11□□□□□ -2.23
GTF1P53260 VAM6YDL077C 3150 nt1.09□□□□□ -2.23
GTF1P53260 FIG2YCR089W 4830 nt1.08□□□□□ -2.24
GTF1P53260 YPR117WYPR117W 7470 nt1.06□□□□□ -2.24
GTF1P53260 NUP192YJL039C 5052 nt1.06□□□□□ -2.24
GTF1P53260 PAU12YGR294W 363 nt1.06□□□□□ -2.24
GTF1P53260 LTE1YAL024C 4308 nt1.05□□□□□ -2.24
GTF1P53260 tH(GUG)E1tH(GUG)E1 72 nt1.05□□□□□ -2.24
GTF1P53260 tH(GUG)E2tH(GUG)E2 72 nt1.05□□□□□ -2.24
GTF1P53260 tH(GUG)G1tH(GUG)G1 72 nt1.05□□□□□ -2.24
GTF1P53260 tH(GUG)G2tH(GUG)G2 72 nt1.05□□□□□ -2.24
GTF1P53260 tH(GUG)HtH(GUG)H 72 nt1.05□□□□□ -2.24
GTF1P53260 tH(GUG)KtH(GUG)K 72 nt1.05□□□□□ -2.24
GTF1P53260 tH(GUG)MtH(GUG)M 72 nt1.05□□□□□ -2.24
GTF1P53260 YKL225WYKL225W 348 nt1.03□□□□□ -2.24
GTF1P53260 SCC2YDR180W 4482 nt1.03□□□□□ -2.24
GTF1P53260 MYO1YHR023W 5787 nt1.02□□□□□ -2.25
GTF1P53260 YJR029WYJR029W 5268 nt1.01□□□□□ -2.25
GTF1P53260 YPR137C-BYPR137C-B 5268 nt1.01□□□□□ -2.25
GTF1P53260 YHR180C-BYHR180C-B 105 nt1.01□□□□□ -2.25
GTF1P53260 YML054C-AYML054C-A 159 nt1.01□□□□□ -2.25
GTF1P53260 YBR109W-AYBR109W-A 225 nt1.01□□□□□ -2.25
GTF1P53260 DOP1YDR141C 5097 nt0.99□□□□□ -2.25
GTF1P53260 RKR1YMR247C 4689 nt0.98□□□□□ -2.25
GTF1P53260 RPL41AYDL184C 78 nt0.97□□□□□ -2.25
GTF1P53260 tQ(UUG)QtQ(UUG)Q 76 nt0.97□□□□□ -2.25
GTF1P53260 YBR296C-AYBR296C-A 120 nt0.97□□□□□ -2.25
GTF1P53260 BEM2YER155C 6504 nt0.97□□□□□ -2.25
GTF1P53260 YNL054W-BYNL054W-B 5250 nt0.95□□□□□ -2.26
GTF1P53260 snR50snR50 90 nt0.94□□□□□ -2.26
GTF1P53260 YER090C-AYER090C-A 90 nt0.93□□□□□ -2.26
GTF1P53260 EMT1tM(CAU)D 73 nt0.93□□□□□ -2.26
GTF1P53260 EMT5tM(CAU)J1 73 nt0.93□□□□□ -2.26
GTF1P53260 EMT3tM(CAU)J2 73 nt0.93□□□□□ -2.26
GTF1P53260 EMT4tM(CAU)M 73 nt0.93□□□□□ -2.26
GTF1P53260 EMT2tM(CAU)O2 73 nt0.93□□□□□ -2.26
GTF1P53260 snR38snR38 95 nt0.93□□□□□ -2.26
GTF1P53260 BUD3YCL014W 4911 nt0.92□□□□□ -2.26
GTF1P53260 YOR192C-BYOR192C-B 5313 nt0.91□□□□□ -2.26
GTF1P53260 YDR371C-AYDR371C-A 105 nt0.91□□□□□ -2.26
GTF1P53260 MLP2YIL149C 5040 nt0.9□□□□□ -2.27
GTF1P53260 tV(UAC)BtV(UAC)B 74 nt0.89□□□□□ -2.27
GTF1P53260 tV(UAC)DtV(UAC)D 74 nt0.89□□□□□ -2.27
GTF1P53260 PET111YMR257C 2403 nt0.89□□□□□ -2.27
GTF1P53260 AI1Q0050 2505 nt0.88□□□□□ -2.27
GTF1P53260 IQG1YPL242C 4488 nt0.87□□□□□ -2.27
GTF1P53260 PAU24YBR301W 363 nt0.84□□□□□ -2.27
GTF1P53260 YBL100W-BYBL100W-B 5313 nt0.82□□□□□ -2.28
GTF1P53260 MLP1YKR095W 5628 nt0.82□□□□□ -2.28
GTF1P53260 IML1YJR138W 4755 nt0.82□□□□□ -2.28
GTF1P53260 SKI7YOR076C 2244 nt0.78□□□□□ -2.28
GTF1P53260 snR67snR67 82 nt0.76□□□□□ -2.29
GTF1P53260 YLR149C-AYLR149C-A 87 nt0.75□□□□□ -2.29
GTF1P53260 YDL159W-AYDL159W-A 132 nt0.74□□□□□ -2.29
GTF1P53260 YMR160WYMR160W 2451 nt0.7□□□□□ -2.3
GTF1P53260 YGR122C-AYGR122C-A 129 nt0.66□□□□□ -2.3
GTF1P53260 YKL096C-BYKL096C-B 150 nt0.66□□□□□ -2.3
GTF1P53260 YMR272W-AYMR272W-A 114 nt0.66□□□□□ -2.3
GTF1P53260 YOR186C-AYOR186C-A 210 nt0.64□□□□□ -2.31
GTF1P53260 YPR159C-AYPR159C-A 102 nt0.6□□□□□ -2.31
GTF1P53260 UTP20YBL004W 7482 nt0.57□□□□□ -2.32
GTF1P53260 tT(AGU)BtT(AGU)B 73 nt0.55□□□□□ -2.32
GTF1P53260 tT(AGU)CtT(AGU)C 73 nt0.55□□□□□ -2.32
GTF1P53260 tT(AGU)DtT(AGU)D 73 nt0.55□□□□□ -2.32
GTF1P53260 tT(AGU)HtT(AGU)H 73 nt0.55□□□□□ -2.32
GTF1P53260 tT(AGU)I1tT(AGU)I1 73 nt0.55□□□□□ -2.32
GTF1P53260 tT(AGU)I2tT(AGU)I2 73 nt0.55□□□□□ -2.32
GTF1P53260 tT(AGU)JtT(AGU)J 73 nt0.55□□□□□ -2.32
GTF1P53260 tT(AGU)N1tT(AGU)N1 73 nt0.55□□□□□ -2.32
GTF1P53260 tT(AGU)N2tT(AGU)N2 73 nt0.55□□□□□ -2.32
GTF1P53260 tT(AGU)O1tT(AGU)O1 73 nt0.55□□□□□ -2.32
GTF1P53260 tT(AGU)O2tT(AGU)O2 73 nt0.55□□□□□ -2.32
GTF1P53260 YML100W-AYML100W-A 174 nt0.54□□□□□ -2.32
GTF1P53260 ESP1YGR098C 4893 nt0.54□□□□□ -2.32
GTF1P53260 SOV1YMR066W 2697 nt0.5□□□□□ -2.33
GTF1P53260 YKL106C-AYKL106C-A 120 nt0.49□□□□□ -2.33
GTF1P53260 UTP10YJL109C 5310 nt0.48□□□□□ -2.33
GTF1P53260 snR75snR75 89 nt0.41□□□□□ -2.34
GTF1P53260 YER078W-AYER078W-A 165 nt0.39□□□□□ -2.35
GTF1P53260 YDL114W-AYDL114W-A 114 nt0.38□□□□□ -2.35
GTF1P53260 tV(UAC)QtV(UAC)Q 76 nt0.35□□□□□ -2.35
GTF1P53260 YOL013W-AYOL013W-A 192 nt0.34□□□□□ -2.36
GTF1P53260 FMP27YLR454W 7887 nt0.32□□□□□ -2.36
GTF1P53260 snR128snR128 126 nt0.31□□□□□ -2.36
GTF1P53260 YOR376W-AYOR376W-A 156 nt0.31□□□□□ -2.36
GTF1P53260 THO2YNL139C 4794 nt0.29□□□□□ -2.36
GTF1P53260 YOR316C-AYOR316C-A 210 nt0.28□□□□□ -2.36
GTF1P53260 PAU9YBL108C-A 129 nt0.19□□□□□ -2.38
GTF1P53260 SBH2YER019C-A 267 nt0.18□□□□□ -2.38
GTF1P53260 snR77snR77 88 nt0.17□□□□□ -2.38
GTF1P53260 YJL113WYJL113W 4647 nt0.17□□□□□ -2.38
GTF1P53260 tA(UGC)QtA(UGC)Q 76 nt0.12□□□□□ -2.39
GTF1P53260 YKL145W-AYKL145W-A 93 nt0.04□□□□□ -2.4
GTF1P53260 snR161snR161 161 nt-0.06□□□□□ -2.42
GTF1P53260 tF(GAA)BtF(GAA)B 73 nt-0.08□□□□□ -2.42
GTF1P53260 tF(GAA)FtF(GAA)F 73 nt-0.08□□□□□ -2.42
GTF1P53260 tF(GAA)GtF(GAA)G 73 nt-0.08□□□□□ -2.42
GTF1P53260 tF(GAA)H1tF(GAA)H1 73 nt-0.08□□□□□ -2.42
GTF1P53260 tF(GAA)H2tF(GAA)H2 73 nt-0.08□□□□□ -2.42
GTF1P53260 tF(GAA)MtF(GAA)M 73 nt-0.08□□□□□ -2.42
Retrieved 100 of 7,029 protein–RNA pairs in 67.8 ms