Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSNK1A1P48729 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSNK1A1P48729 KRT16P6-202ENST00000425692 1426 ntBASIC17.74■□□□□ 0.43
CSNK1A1P48729 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.74■□□□□ 0.43
CSNK1A1P48729 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CSNK1A1P48729 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CSNK1A1P48729 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSNK1A1P48729 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CSNK1A1P48729 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.74■□□□□ 0.43
CSNK1A1P48729 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.74■□□□□ 0.43
CSNK1A1P48729 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CSNK1A1P48729 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.74■□□□□ 0.43
CSNK1A1P48729 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CSNK1A1P48729 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.74■□□□□ 0.43
CSNK1A1P48729 AL138781.1-201ENST00000566567 1274 ntBASIC17.74■□□□□ 0.43
CSNK1A1P48729 AC104771.1-201ENST00000603335 964 ntBASIC17.74■□□□□ 0.43
CSNK1A1P48729 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
CSNK1A1P48729 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSNK1A1P48729 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSNK1A1P48729 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSNK1A1P48729 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
CSNK1A1P48729 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.74■□□□□ 0.43
CSNK1A1P48729 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK1A1P48729 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK1A1P48729 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK1A1P48729 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK1A1P48729 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK1A1P48729 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK1A1P48729 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK1A1P48729 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK1A1P48729 TCF3P1-201ENST00000423021 1937 ntBASIC17.73■□□□□ 0.43
CSNK1A1P48729 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CSNK1A1P48729 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CSNK1A1P48729 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.73■□□□□ 0.43
CSNK1A1P48729 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK1A1P48729 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.73■□□□□ 0.43
CSNK1A1P48729 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.73■□□□□ 0.43
CSNK1A1P48729 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.73■□□□□ 0.43
CSNK1A1P48729 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.73■□□□□ 0.43
CSNK1A1P48729 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CSNK1A1P48729 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.73■□□□□ 0.43
CSNK1A1P48729 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK1A1P48729 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.73■□□□□ 0.43
CSNK1A1P48729 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CSNK1A1P48729 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.73■□□□□ 0.43
CSNK1A1P48729 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK1A1P48729 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.73■□□□□ 0.43
CSNK1A1P48729 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK1A1P48729 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CSNK1A1P48729 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK1A1P48729 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.73■□□□□ 0.43
CSNK1A1P48729 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK1A1P48729 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK1A1P48729 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSNK1A1P48729 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CSNK1A1P48729 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.72■□□□□ 0.43
CSNK1A1P48729 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK1A1P48729 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK1A1P48729 PCDHAC2-203ENST00000615316 3011 ntBASIC17.72■□□□□ 0.43
CSNK1A1P48729 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CSNK1A1P48729 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK1A1P48729 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CSNK1A1P48729 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK1A1P48729 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK1A1P48729 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK1A1P48729 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.72■□□□□ 0.43
CSNK1A1P48729 AC097658.1-201ENST00000475555 843 ntBASIC17.72■□□□□ 0.43
CSNK1A1P48729 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.72■□□□□ 0.43
CSNK1A1P48729 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.72■□□□□ 0.43
CSNK1A1P48729 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.72■□□□□ 0.43
CSNK1A1P48729 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.72■□□□□ 0.43
CSNK1A1P48729 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.72■□□□□ 0.43
CSNK1A1P48729 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.72■□□□□ 0.43
CSNK1A1P48729 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
CSNK1A1P48729 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK1A1P48729 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK1A1P48729 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK1A1P48729 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK1A1P48729 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CSNK1A1P48729 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
CSNK1A1P48729 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CSNK1A1P48729 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK1A1P48729 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.72■□□□□ 0.43
CSNK1A1P48729 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSNK1A1P48729 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.72■□□□□ 0.43
CSNK1A1P48729 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
CSNK1A1P48729 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK1A1P48729 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK1A1P48729 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK1A1P48729 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK1A1P48729 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.71■□□□□ 0.43
CSNK1A1P48729 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK1A1P48729 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CSNK1A1P48729 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CSNK1A1P48729 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CSNK1A1P48729 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.71■□□□□ 0.43
CSNK1A1P48729 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.71■□□□□ 0.43
CSNK1A1P48729 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.71■□□□□ 0.43
CSNK1A1P48729 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CSNK1A1P48729 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms