Protein–RNA interactions for Protein: P0C0W9

RPL11A, 60S ribosomal protein L11-A, yeastyeast

Known RBP Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL11AP0C0W9 tH(GUG)E2tH(GUG)E2 72 nt1.01□□□□□ -2.25
RPL11AP0C0W9 tH(GUG)G1tH(GUG)G1 72 nt1.01□□□□□ -2.25
RPL11AP0C0W9 tH(GUG)G2tH(GUG)G2 72 nt1.01□□□□□ -2.25
RPL11AP0C0W9 tH(GUG)HtH(GUG)H 72 nt1.01□□□□□ -2.25
RPL11AP0C0W9 tH(GUG)KtH(GUG)K 72 nt1.01□□□□□ -2.25
RPL11AP0C0W9 tH(GUG)MtH(GUG)M 72 nt1.01□□□□□ -2.25
RPL11AP0C0W9 YGR240C-AYGR240C-A 201 nt1.01□□□□□ -2.25
RPL11AP0C0W9 YLR299C-AYLR299C-A 93 nt1.01□□□□□ -2.25
RPL11AP0C0W9 NST1YNL091W 3723 nt1.01□□□□□ -2.25
RPL11AP0C0W9 YPL060C-AYPL060C-A 3315 nt1□□□□□ -2.25
RPL11AP0C0W9 YDL159C-BYDL159C-B 177 nt1□□□□□ -2.25
RPL11AP0C0W9 YDR034C-AYDR034C-A 177 nt0.99□□□□□ -2.25
RPL11AP0C0W9 LTE1YAL024C 4308 nt0.98□□□□□ -2.25
RPL11AP0C0W9 YOR192C-BYOR192C-B 5313 nt0.98□□□□□ -2.25
RPL11AP0C0W9 PAU12YGR294W 363 nt0.96□□□□□ -2.26
RPL11AP0C0W9 tV(UAC)BtV(UAC)B 74 nt0.96□□□□□ -2.26
RPL11AP0C0W9 tV(UAC)DtV(UAC)D 74 nt0.96□□□□□ -2.26
RPL11AP0C0W9 PET111YMR257C 2403 nt0.95□□□□□ -2.26
RPL11AP0C0W9 snR47snR47 99 nt0.93□□□□□ -2.26
RPL11AP0C0W9 YDR371C-AYDR371C-A 105 nt0.92□□□□□ -2.26
RPL11AP0C0W9 tQ(UUG)QtQ(UUG)Q 76 nt0.91□□□□□ -2.26
RPL11AP0C0W9 PAU24YBR301W 363 nt0.88□□□□□ -2.27
RPL11AP0C0W9 EMT1tM(CAU)D 73 nt0.87□□□□□ -2.27
RPL11AP0C0W9 EMT5tM(CAU)J1 73 nt0.87□□□□□ -2.27
RPL11AP0C0W9 EMT3tM(CAU)J2 73 nt0.87□□□□□ -2.27
RPL11AP0C0W9 EMT4tM(CAU)M 73 nt0.87□□□□□ -2.27
RPL11AP0C0W9 EMT2tM(CAU)O2 73 nt0.87□□□□□ -2.27
RPL11AP0C0W9 ORC3YLL004W 1851 nt0.84□□□□□ -2.27
RPL11AP0C0W9 DOP1YDR141C 5097 nt0.84□□□□□ -2.27
RPL11AP0C0W9 IML1YJR138W 4755 nt0.81□□□□□ -2.28
RPL11AP0C0W9 MLP1YKR095W 5628 nt0.81□□□□□ -2.28
RPL11AP0C0W9 VAM6YDL077C 3150 nt0.81□□□□□ -2.28
RPL11AP0C0W9 YHR180C-BYHR180C-B 105 nt0.81□□□□□ -2.28
RPL11AP0C0W9 YML054C-AYML054C-A 159 nt0.81□□□□□ -2.28
RPL11AP0C0W9 YER090C-AYER090C-A 90 nt0.78□□□□□ -2.28
RPL11AP0C0W9 BEM2YER155C 6504 nt0.76□□□□□ -2.29
RPL11AP0C0W9 snR50snR50 90 nt0.74□□□□□ -2.29
RPL11AP0C0W9 YBL100W-BYBL100W-B 5313 nt0.73□□□□□ -2.29
RPL11AP0C0W9 AI1Q0050 2505 nt0.71□□□□□ -2.3
RPL11AP0C0W9 RPL41AYDL184C 78 nt0.71□□□□□ -2.3
RPL11AP0C0W9 YPR159C-AYPR159C-A 102 nt0.71□□□□□ -2.3
RPL11AP0C0W9 YBR109W-AYBR109W-A 225 nt0.71□□□□□ -2.3
RPL11AP0C0W9 YBR296C-AYBR296C-A 120 nt0.69□□□□□ -2.3
RPL11AP0C0W9 snR64snR64 101 nt0.67□□□□□ -2.3
RPL11AP0C0W9 YKL225WYKL225W 348 nt0.67□□□□□ -2.3
RPL11AP0C0W9 YNL054W-BYNL054W-B 5250 nt0.66□□□□□ -2.3
RPL11AP0C0W9 YOR186C-AYOR186C-A 210 nt0.66□□□□□ -2.3
RPL11AP0C0W9 IQG1YPL242C 4488 nt0.62□□□□□ -2.31
RPL11AP0C0W9 MYO1YHR023W 5787 nt0.62□□□□□ -2.31
RPL11AP0C0W9 UTP10YJL109C 5310 nt0.62□□□□□ -2.31
RPL11AP0C0W9 snR67snR67 82 nt0.61□□□□□ -2.31
RPL11AP0C0W9 snR53snR53 91 nt0.61□□□□□ -2.31
RPL11AP0C0W9 YMR160WYMR160W 2451 nt0.61□□□□□ -2.31
RPL11AP0C0W9 snR38snR38 95 nt0.59□□□□□ -2.31
RPL11AP0C0W9 MLP2YIL149C 5040 nt0.56□□□□□ -2.32
RPL11AP0C0W9 FMP27YLR454W 7887 nt0.53□□□□□ -2.32
RPL11AP0C0W9 YMR272W-AYMR272W-A 114 nt0.53□□□□□ -2.32
RPL11AP0C0W9 UTP20YBL004W 7482 nt0.51□□□□□ -2.33
RPL11AP0C0W9 tF(GAA)BtF(GAA)B 73 nt0.48□□□□□ -2.33
RPL11AP0C0W9 tF(GAA)FtF(GAA)F 73 nt0.48□□□□□ -2.33
RPL11AP0C0W9 tF(GAA)GtF(GAA)G 73 nt0.48□□□□□ -2.33
RPL11AP0C0W9 tF(GAA)H1tF(GAA)H1 73 nt0.48□□□□□ -2.33
RPL11AP0C0W9 tF(GAA)H2tF(GAA)H2 73 nt0.48□□□□□ -2.33
RPL11AP0C0W9 tF(GAA)MtF(GAA)M 73 nt0.48□□□□□ -2.33
RPL11AP0C0W9 tF(GAA)P1tF(GAA)P1 73 nt0.48□□□□□ -2.33
RPL11AP0C0W9 tF(GAA)P2tF(GAA)P2 73 nt0.48□□□□□ -2.33
RPL11AP0C0W9 YKL145W-AYKL145W-A 93 nt0.44□□□□□ -2.34
RPL11AP0C0W9 tT(AGU)BtT(AGU)B 73 nt0.43□□□□□ -2.34
RPL11AP0C0W9 tT(AGU)CtT(AGU)C 73 nt0.43□□□□□ -2.34
RPL11AP0C0W9 tT(AGU)DtT(AGU)D 73 nt0.43□□□□□ -2.34
RPL11AP0C0W9 tT(AGU)HtT(AGU)H 73 nt0.43□□□□□ -2.34
RPL11AP0C0W9 tT(AGU)I1tT(AGU)I1 73 nt0.43□□□□□ -2.34
RPL11AP0C0W9 tT(AGU)I2tT(AGU)I2 73 nt0.43□□□□□ -2.34
RPL11AP0C0W9 tT(AGU)JtT(AGU)J 73 nt0.43□□□□□ -2.34
RPL11AP0C0W9 tT(AGU)N1tT(AGU)N1 73 nt0.43□□□□□ -2.34
RPL11AP0C0W9 tT(AGU)N2tT(AGU)N2 73 nt0.43□□□□□ -2.34
RPL11AP0C0W9 tT(AGU)O1tT(AGU)O1 73 nt0.43□□□□□ -2.34
RPL11AP0C0W9 tT(AGU)O2tT(AGU)O2 73 nt0.43□□□□□ -2.34
RPL11AP0C0W9 SKI7YOR076C 2244 nt0.42□□□□□ -2.34
RPL11AP0C0W9 YML100W-AYML100W-A 174 nt0.41□□□□□ -2.34
RPL11AP0C0W9 SOV1YMR066W 2697 nt0.4□□□□□ -2.35
RPL11AP0C0W9 YOL014WYOL014W 375 nt0.36□□□□□ -2.35
RPL11AP0C0W9 YOL013W-AYOL013W-A 192 nt0.35□□□□□ -2.35
RPL11AP0C0W9 THO2YNL139C 4794 nt0.33□□□□□ -2.36
RPL11AP0C0W9 YDL159W-AYDL159W-A 132 nt0.33□□□□□ -2.36
RPL11AP0C0W9 snR128snR128 126 nt0.31□□□□□ -2.36
RPL11AP0C0W9 ESP1YGR098C 4893 nt0.28□□□□□ -2.36
RPL11AP0C0W9 YGR122C-AYGR122C-A 129 nt0.27□□□□□ -2.37
RPL11AP0C0W9 YKL106C-AYKL106C-A 120 nt0.24□□□□□ -2.37
RPL11AP0C0W9 YLR149C-AYLR149C-A 87 nt0.17□□□□□ -2.38
RPL11AP0C0W9 PAU9YBL108C-A 129 nt0.16□□□□□ -2.38
RPL11AP0C0W9 YER078W-AYER078W-A 165 nt0.14□□□□□ -2.39
RPL11AP0C0W9 YOR376W-AYOR376W-A 156 nt0.06□□□□□ -2.4
RPL11AP0C0W9 YKL096C-BYKL096C-B 150 nt0.02□□□□□ -2.41
RPL11AP0C0W9 YDL114W-AYDL114W-A 114 nt0.01□□□□□ -2.41
RPL11AP0C0W9 tA(UGC)QtA(UGC)Q 76 nt0□□□□□ -2.41
RPL11AP0C0W9 YOR316C-AYOR316C-A 210 nt-0.01□□□□□ -2.41
RPL11AP0C0W9 tV(UAC)QtV(UAC)Q 76 nt-0.08□□□□□ -2.42
RPL11AP0C0W9 SBH2YER019C-A 267 nt-0.09□□□□□ -2.42
RPL11AP0C0W9 snR77snR77 88 nt-0.16□□□□□ -2.44
Retrieved 100 of 7,029 protein–RNA pairs in 34.1 ms