Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.78■□□□□ 0.92
LRCH4O75427 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LRCH4O75427 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
LRCH4O75427 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
LRCH4O75427 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.78■□□□□ 0.92
LRCH4O75427 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.77■□□□□ 0.92
LRCH4O75427 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.77■□□□□ 0.92
LRCH4O75427 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LRCH4O75427 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRCH4O75427 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRCH4O75427 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRCH4O75427 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRCH4O75427 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.77■□□□□ 0.92
LRCH4O75427 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.77■□□□□ 0.92
LRCH4O75427 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRCH4O75427 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRCH4O75427 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRCH4O75427 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRCH4O75427 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.77■□□□□ 0.92
LRCH4O75427 AC091874.3-201ENST00000512672 1195 ntBASIC20.77■□□□□ 0.92
LRCH4O75427 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.77■□□□□ 0.92
LRCH4O75427 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.77■□□□□ 0.92
LRCH4O75427 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.77■□□□□ 0.92
LRCH4O75427 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.77■□□□□ 0.92
LRCH4O75427 AL158211.5-201ENST00000623583 2518 ntBASIC20.77■□□□□ 0.92
LRCH4O75427 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.77■□□□□ 0.92
LRCH4O75427 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRCH4O75427 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.77■□□□□ 0.91
LRCH4O75427 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
LRCH4O75427 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
LRCH4O75427 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.77■□□□□ 0.91
LRCH4O75427 AC009237.14-201ENST00000609975 1594 ntBASIC20.76■□□□□ 0.91
LRCH4O75427 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRCH4O75427 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRCH4O75427 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRCH4O75427 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRCH4O75427 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
LRCH4O75427 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.76■□□□□ 0.91
LRCH4O75427 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRCH4O75427 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRCH4O75427 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
LRCH4O75427 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.76■□□□□ 0.91
LRCH4O75427 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.76■□□□□ 0.91
LRCH4O75427 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.76■□□□□ 0.91
LRCH4O75427 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.76■□□□□ 0.91
LRCH4O75427 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
LRCH4O75427 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRCH4O75427 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRCH4O75427 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRCH4O75427 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRCH4O75427 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.75■□□□□ 0.91
LRCH4O75427 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LRCH4O75427 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
LRCH4O75427 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.75■□□□□ 0.91
LRCH4O75427 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.75■□□□□ 0.91
LRCH4O75427 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
LRCH4O75427 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.75■□□□□ 0.91
LRCH4O75427 AC090192.1-201ENST00000517740 490 ntBASIC20.75■□□□□ 0.91
LRCH4O75427 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.75■□□□□ 0.91
LRCH4O75427 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LRCH4O75427 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRCH4O75427 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.75■□□□□ 0.91
LRCH4O75427 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRCH4O75427 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LRCH4O75427 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
LRCH4O75427 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LRCH4O75427 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.75■□□□□ 0.91
LRCH4O75427 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRCH4O75427 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRCH4O75427 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRCH4O75427 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.74■□□□□ 0.91
LRCH4O75427 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRCH4O75427 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
LRCH4O75427 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRCH4O75427 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.74■□□□□ 0.91
LRCH4O75427 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.74■□□□□ 0.91
LRCH4O75427 AC098934.4-201ENST00000564127 592 ntBASIC20.74■□□□□ 0.91
LRCH4O75427 AL138781.1-201ENST00000566567 1274 ntBASIC20.74■□□□□ 0.91
LRCH4O75427 MIR4758-201ENST00000577688 71 ntBASIC20.74■□□□□ 0.91
LRCH4O75427 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.74■□□□□ 0.91
LRCH4O75427 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.74■□□□□ 0.91
LRCH4O75427 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRCH4O75427 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.74■□□□□ 0.91
LRCH4O75427 MYC-209ENST00000641252 345 ntBASIC20.74■□□□□ 0.91
LRCH4O75427 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.74■□□□□ 0.91
LRCH4O75427 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.74■□□□□ 0.91
LRCH4O75427 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRCH4O75427 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRCH4O75427 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRCH4O75427 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRCH4O75427 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRCH4O75427 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRCH4O75427 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.73■□□□□ 0.91
LRCH4O75427 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRCH4O75427 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRCH4O75427 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
LRCH4O75427 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRCH4O75427 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.73■□□□□ 0.91
LRCH4O75427 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.73■□□□□ 0.91
LRCH4O75427 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms