Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MBD3L4A6NDZ8 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MBD3L4A6NDZ8 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
MBD3L4A6NDZ8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MBD3L4A6NDZ8 AL355355.2-201ENST00000442321 338 ntBASIC17.59■□□□□ 0.41
MBD3L4A6NDZ8 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MBD3L4A6NDZ8 AP002982.1-201ENST00000492365 877 ntBASIC17.59■□□□□ 0.41
MBD3L4A6NDZ8 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
MBD3L4A6NDZ8 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MBD3L4A6NDZ8 AL355075.4-201ENST00000554988 638 ntBASIC17.59■□□□□ 0.41
MBD3L4A6NDZ8 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
MBD3L4A6NDZ8 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.59■□□□□ 0.41
MBD3L4A6NDZ8 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.59■□□□□ 0.41
MBD3L4A6NDZ8 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MBD3L4A6NDZ8 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MBD3L4A6NDZ8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
MBD3L4A6NDZ8 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.59■□□□□ 0.41
MBD3L4A6NDZ8 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
MBD3L4A6NDZ8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
MBD3L4A6NDZ8 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MBD3L4A6NDZ8 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MBD3L4A6NDZ8 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
MBD3L4A6NDZ8 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MBD3L4A6NDZ8 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MBD3L4A6NDZ8 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MBD3L4A6NDZ8 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MBD3L4A6NDZ8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MBD3L4A6NDZ8 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MBD3L4A6NDZ8 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
MBD3L4A6NDZ8 FAM197Y1-201ENST00000421178 764 ntBASIC17.58■□□□□ 0.4
MBD3L4A6NDZ8 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MBD3L4A6NDZ8 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.58■□□□□ 0.4
MBD3L4A6NDZ8 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.58■□□□□ 0.4
MBD3L4A6NDZ8 AP003071.4-201ENST00000562276 1284 ntBASIC17.58■□□□□ 0.4
MBD3L4A6NDZ8 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MBD3L4A6NDZ8 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MBD3L4A6NDZ8 TFP1-202ENST00000475455 1573 ntBASIC17.57■□□□□ 0.4
MBD3L4A6NDZ8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
MBD3L4A6NDZ8 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.57■□□□□ 0.4
MBD3L4A6NDZ8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.57■□□□□ 0.4
MBD3L4A6NDZ8 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.57■□□□□ 0.4
MBD3L4A6NDZ8 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.57■□□□□ 0.4
MBD3L4A6NDZ8 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
MBD3L4A6NDZ8 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MBD3L4A6NDZ8 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MBD3L4A6NDZ8 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
MBD3L4A6NDZ8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.57■□□□□ 0.4
MBD3L4A6NDZ8 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MBD3L4A6NDZ8 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
MBD3L4A6NDZ8 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.57■□□□□ 0.4
MBD3L4A6NDZ8 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
MBD3L4A6NDZ8 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.57■□□□□ 0.4
MBD3L4A6NDZ8 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.57■□□□□ 0.4
MBD3L4A6NDZ8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
MBD3L4A6NDZ8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.57■□□□□ 0.4
MBD3L4A6NDZ8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.57■□□□□ 0.4
MBD3L4A6NDZ8 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MBD3L4A6NDZ8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MBD3L4A6NDZ8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.57■□□□□ 0.4
MBD3L4A6NDZ8 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MBD3L4A6NDZ8 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
MBD3L4A6NDZ8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
MBD3L4A6NDZ8 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
MBD3L4A6NDZ8 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.56■□□□□ 0.4
MBD3L4A6NDZ8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MBD3L4A6NDZ8 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
MBD3L4A6NDZ8 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
MBD3L4A6NDZ8 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
MBD3L4A6NDZ8 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
MBD3L4A6NDZ8 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
MBD3L4A6NDZ8 AC211429.1-201ENST00000415277 523 ntBASIC17.56■□□□□ 0.4
MBD3L4A6NDZ8 NIFKP9-201ENST00000419265 221 ntBASIC17.56■□□□□ 0.4
MBD3L4A6NDZ8 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.56■□□□□ 0.4
MBD3L4A6NDZ8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.56■□□□□ 0.4
MBD3L4A6NDZ8 TSPY15P-201ENST00000457163 923 ntBASIC17.56■□□□□ 0.4
MBD3L4A6NDZ8 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.56■□□□□ 0.4
MBD3L4A6NDZ8 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MBD3L4A6NDZ8 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.56■□□□□ 0.4
MBD3L4A6NDZ8 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.56■□□□□ 0.4
MBD3L4A6NDZ8 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.56■□□□□ 0.4
MBD3L4A6NDZ8 LINC01023-201ENST00000606054 436 ntBASIC17.56■□□□□ 0.4
MBD3L4A6NDZ8 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MBD3L4A6NDZ8 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MBD3L4A6NDZ8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MBD3L4A6NDZ8 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.56■□□□□ 0.4
MBD3L4A6NDZ8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
MBD3L4A6NDZ8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
MBD3L4A6NDZ8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.56■□□□□ 0.4
MBD3L4A6NDZ8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MBD3L4A6NDZ8 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MBD3L4A6NDZ8 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MBD3L4A6NDZ8 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
MBD3L4A6NDZ8 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MBD3L4A6NDZ8 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
MBD3L4A6NDZ8 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MBD3L4A6NDZ8 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.55■□□□□ 0.4
MBD3L4A6NDZ8 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MBD3L4A6NDZ8 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MBD3L4A6NDZ8 ECEL1P3-201ENST00000427961 737 ntBASIC17.55■□□□□ 0.4
MBD3L4A6NDZ8 YBX1P10-201ENST00000444752 975 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms