Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Igkv8-27A0A0G2JF28 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv8-27A0A0G2JF28 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC10.85□□□□□ -0.67
Igkv8-27A0A0G2JF28 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC10.85□□□□□ -0.67
Igkv8-27A0A0G2JF28 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Igkv8-27A0A0G2JF28 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv8-27A0A0G2JF28 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv8-27A0A0G2JF28 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv8-27A0A0G2JF28 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv8-27A0A0G2JF28 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv8-27A0A0G2JF28 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv8-27A0A0G2JF28 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv8-27A0A0G2JF28 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv8-27A0A0G2JF28 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv8-27A0A0G2JF28 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC10.85□□□□□ -0.67
Igkv8-27A0A0G2JF28 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv8-27A0A0G2JF28 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC10.85□□□□□ -0.67
Igkv8-27A0A0G2JF28 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv8-27A0A0G2JF28 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-27A0A0G2JF28 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC10.84□□□□□ -0.67
Igkv8-27A0A0G2JF28 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-27A0A0G2JF28 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-27A0A0G2JF28 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-27A0A0G2JF28 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-27A0A0G2JF28 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-27A0A0G2JF28 AC125311.2-201ENSMUST00000227477 1940 ntBASIC10.84□□□□□ -0.67
Igkv8-27A0A0G2JF28 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-27A0A0G2JF28 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-27A0A0G2JF28 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-27A0A0G2JF28 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC10.84□□□□□ -0.67
Igkv8-27A0A0G2JF28 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Igkv8-27A0A0G2JF28 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-27A0A0G2JF28 Gm7417-201ENSMUST00000192950 473 ntBASIC10.84□□□□□ -0.67
Igkv8-27A0A0G2JF28 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC10.84□□□□□ -0.67
Igkv8-27A0A0G2JF28 Gm18755-201ENSMUST00000218030 1099 ntBASIC10.84□□□□□ -0.67
Igkv8-27A0A0G2JF28 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Igkv8-27A0A0G2JF28 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-27A0A0G2JF28 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-27A0A0G2JF28 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-27A0A0G2JF28 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-27A0A0G2JF28 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-27A0A0G2JF28 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-27A0A0G2JF28 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-27A0A0G2JF28 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-27A0A0G2JF28 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC10.84□□□□□ -0.67
Igkv8-27A0A0G2JF28 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-27A0A0G2JF28 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Igkv8-27A0A0G2JF28 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-27A0A0G2JF28 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-27A0A0G2JF28 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-27A0A0G2JF28 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-27A0A0G2JF28 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv8-27A0A0G2JF28 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC10.83□□□□□ -0.68
Igkv8-27A0A0G2JF28 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-27A0A0G2JF28 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Igkv8-27A0A0G2JF28 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Igkv8-27A0A0G2JF28 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-27A0A0G2JF28 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-27A0A0G2JF28 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-27A0A0G2JF28 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-27A0A0G2JF28 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-27A0A0G2JF28 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-27A0A0G2JF28 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC10.83□□□□□ -0.68
Igkv8-27A0A0G2JF28 Gm26971-201ENSMUST00000182423 1072 ntBASIC10.83□□□□□ -0.68
Igkv8-27A0A0G2JF28 Mir6538-201ENSMUST00000183713 110 ntBASIC10.83□□□□□ -0.68
Igkv8-27A0A0G2JF28 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC10.83□□□□□ -0.68
Igkv8-27A0A0G2JF28 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-27A0A0G2JF28 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-27A0A0G2JF28 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-27A0A0G2JF28 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-27A0A0G2JF28 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-27A0A0G2JF28 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-27A0A0G2JF28 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC10.83□□□□□ -0.68
Igkv8-27A0A0G2JF28 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-27A0A0G2JF28 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Igkv8-27A0A0G2JF28 Gm16499-203ENSMUST00000204633 2177 ntBASIC10.83□□□□□ -0.68
Igkv8-27A0A0G2JF28 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-27A0A0G2JF28 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Igkv8-27A0A0G2JF28 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-27A0A0G2JF28 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-27A0A0G2JF28 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Igkv8-27A0A0G2JF28 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-27A0A0G2JF28 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-27A0A0G2JF28 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv8-27A0A0G2JF28 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Igkv8-27A0A0G2JF28 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-27A0A0G2JF28 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-27A0A0G2JF28 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-27A0A0G2JF28 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Igkv8-27A0A0G2JF28 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-27A0A0G2JF28 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Igkv8-27A0A0G2JF28 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Igkv8-27A0A0G2JF28 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-27A0A0G2JF28 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-27A0A0G2JF28 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-27A0A0G2JF28 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-27A0A0G2JF28 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-27A0A0G2JF28 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-27A0A0G2JF28 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv8-27A0A0G2JF28 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms