Protein–RNA interactions for Protein: S4R1M6

Gm27027, Predicted gene, 27027 (Fragment), mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm27027S4R1M6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm27027S4R1M6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm27027S4R1M6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm27027S4R1M6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Gm27027S4R1M6 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Gm27027S4R1M6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm27027S4R1M6 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gm27027S4R1M6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm27027S4R1M6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm27027S4R1M6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gm27027S4R1M6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gm27027S4R1M6 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm27027S4R1M6 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm27027S4R1M6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm27027S4R1M6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm27027S4R1M6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm27027S4R1M6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Gm27027S4R1M6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
Gm27027S4R1M6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm27027S4R1M6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm27027S4R1M6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gm27027S4R1M6 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Gm27027S4R1M6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Gm27027S4R1M6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gm27027S4R1M6 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Gm27027S4R1M6 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.34■□□□□ 0.53
Gm27027S4R1M6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm27027S4R1M6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Gm27027S4R1M6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Gm27027S4R1M6 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.34■□□□□ 0.53
Gm27027S4R1M6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC18.33■□□□□ 0.53
Gm27027S4R1M6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm27027S4R1M6 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Gm27027S4R1M6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Gm27027S4R1M6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Gm27027S4R1M6 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm27027S4R1M6 Gm27322-201ENSMUST00000184007 104 ntBASIC18.32■□□□□ 0.52
Gm27027S4R1M6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.32■□□□□ 0.52
Gm27027S4R1M6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm27027S4R1M6 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm27027S4R1M6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Gm27027S4R1M6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Gm27027S4R1M6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Gm27027S4R1M6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm27027S4R1M6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Gm27027S4R1M6 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Gm27027S4R1M6 Gm17082-201ENSMUST00000166043 1091 ntBASIC18.3■□□□□ 0.52
Gm27027S4R1M6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gm27027S4R1M6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm27027S4R1M6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Gm27027S4R1M6 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm27027S4R1M6 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm27027S4R1M6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm27027S4R1M6 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm27027S4R1M6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
Gm27027S4R1M6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm27027S4R1M6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm27027S4R1M6 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Gm27027S4R1M6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm27027S4R1M6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Gm27027S4R1M6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm27027S4R1M6 Gm25262-201ENSMUST00000174934 133 ntBASIC18.26■□□□□ 0.51
Gm27027S4R1M6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Gm27027S4R1M6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm27027S4R1M6 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm27027S4R1M6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm27027S4R1M6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Gm27027S4R1M6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm27027S4R1M6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Gm27027S4R1M6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm27027S4R1M6 Peli2-204ENSMUST00000226513 1320 ntBASIC18.23■□□□□ 0.51
Gm27027S4R1M6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Gm27027S4R1M6 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm27027S4R1M6 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm27027S4R1M6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm27027S4R1M6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm27027S4R1M6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm27027S4R1M6 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm27027S4R1M6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Gm27027S4R1M6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm27027S4R1M6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm27027S4R1M6 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm27027S4R1M6 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm27027S4R1M6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm27027S4R1M6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm27027S4R1M6 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm27027S4R1M6 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Gm27027S4R1M6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm27027S4R1M6 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Gm27027S4R1M6 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm27027S4R1M6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm27027S4R1M6 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.18■□□□□ 0.5
Gm27027S4R1M6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm27027S4R1M6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Gm27027S4R1M6 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm27027S4R1M6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm27027S4R1M6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Gm27027S4R1M6 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm27027S4R1M6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm27027S4R1M6 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 8.6 ms