Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Hdac6Q9Z2V5 Particl-201ENSMUST00000205370 1560 ntBASIC31.02■■■□□ 2.56
Hdac6Q9Z2V5 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
Hdac6Q9Z2V5 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC31.02■■■□□ 2.56
Hdac6Q9Z2V5 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Hdac6Q9Z2V5 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Hdac6Q9Z2V5 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.55
Hdac6Q9Z2V5 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC31■■■□□ 2.55
Hdac6Q9Z2V5 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC31■■■□□ 2.55
Hdac6Q9Z2V5 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC31■■■□□ 2.55
Hdac6Q9Z2V5 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
Hdac6Q9Z2V5 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Hdac6Q9Z2V5 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC30.97■■■□□ 2.55
Hdac6Q9Z2V5 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
Hdac6Q9Z2V5 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Hdac6Q9Z2V5 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC30.95■■■□□ 2.55
Hdac6Q9Z2V5 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30.94■■■□□ 2.54
Hdac6Q9Z2V5 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Hdac6Q9Z2V5 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Hdac6Q9Z2V5 Pcf11-205ENSMUST00000208255 1720 ntBASIC30.92■■■□□ 2.54
Hdac6Q9Z2V5 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Hdac6Q9Z2V5 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC30.9■■■□□ 2.54
Hdac6Q9Z2V5 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Hdac6Q9Z2V5 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Hdac6Q9Z2V5 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC30.89■■■□□ 2.54
Hdac6Q9Z2V5 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
Hdac6Q9Z2V5 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
Hdac6Q9Z2V5 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC30.88■■■□□ 2.53
Hdac6Q9Z2V5 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Hdac6Q9Z2V5 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Hdac6Q9Z2V5 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Hdac6Q9Z2V5 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC30.86■■■□□ 2.53
Hdac6Q9Z2V5 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Hdac6Q9Z2V5 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Hdac6Q9Z2V5 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC30.84■■■□□ 2.53
Hdac6Q9Z2V5 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Hdac6Q9Z2V5 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Hdac6Q9Z2V5 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Hdac6Q9Z2V5 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Hdac6Q9Z2V5 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC30.81■■■□□ 2.52
Hdac6Q9Z2V5 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC30.8■■■□□ 2.52
Hdac6Q9Z2V5 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Hdac6Q9Z2V5 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Hdac6Q9Z2V5 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC30.8■■■□□ 2.52
Hdac6Q9Z2V5 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Hdac6Q9Z2V5 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Hdac6Q9Z2V5 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC30.79■■■□□ 2.52
Hdac6Q9Z2V5 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Hdac6Q9Z2V5 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
Hdac6Q9Z2V5 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC30.78■■■□□ 2.52
Hdac6Q9Z2V5 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC30.77■■■□□ 2.52
Hdac6Q9Z2V5 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC30.76■■■□□ 2.51
Hdac6Q9Z2V5 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Hdac6Q9Z2V5 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Hdac6Q9Z2V5 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Hdac6Q9Z2V5 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
Hdac6Q9Z2V5 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC30.75■■■□□ 2.51
Hdac6Q9Z2V5 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Hdac6Q9Z2V5 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
Hdac6Q9Z2V5 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC30.72■■■□□ 2.51
Hdac6Q9Z2V5 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC30.71■■■□□ 2.51
Hdac6Q9Z2V5 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Hdac6Q9Z2V5 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Hdac6Q9Z2V5 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Hdac6Q9Z2V5 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.51
Hdac6Q9Z2V5 Scarna2-201ENSMUST00000157560 414 ntBASIC30.7■■■□□ 2.51
Hdac6Q9Z2V5 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Hdac6Q9Z2V5 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
Hdac6Q9Z2V5 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
Hdac6Q9Z2V5 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Hdac6Q9Z2V5 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Hdac6Q9Z2V5 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Hdac6Q9Z2V5 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Hdac6Q9Z2V5 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Hdac6Q9Z2V5 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Hdac6Q9Z2V5 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Hdac6Q9Z2V5 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC30.63■■■□□ 2.49
Hdac6Q9Z2V5 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Hdac6Q9Z2V5 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Hdac6Q9Z2V5 Gm9806-201ENSMUST00000051080 552 ntBASIC30.61■■■□□ 2.49
Hdac6Q9Z2V5 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Hdac6Q9Z2V5 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC30.61■■■□□ 2.49
Hdac6Q9Z2V5 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC30.6■■■□□ 2.49
Hdac6Q9Z2V5 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Hdac6Q9Z2V5 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Hdac6Q9Z2V5 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Hdac6Q9Z2V5 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC30.59■■■□□ 2.49
Hdac6Q9Z2V5 Gm11687-201ENSMUST00000118911 886 ntBASIC30.59■■■□□ 2.49
Hdac6Q9Z2V5 Gm12366-201ENSMUST00000121722 873 ntBASIC30.59■■■□□ 2.49
Hdac6Q9Z2V5 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC30.59■■■□□ 2.49
Hdac6Q9Z2V5 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC30.59■■■□□ 2.49
Hdac6Q9Z2V5 Gm5786-201ENSMUST00000085368 882 ntBASIC30.59■■■□□ 2.49
Hdac6Q9Z2V5 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Hdac6Q9Z2V5 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Hdac6Q9Z2V5 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Hdac6Q9Z2V5 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC30.58■■■□□ 2.49
Hdac6Q9Z2V5 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Hdac6Q9Z2V5 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Hdac6Q9Z2V5 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Hdac6Q9Z2V5 Gm4799-201ENSMUST00000095396 657 ntBASIC30.55■■■□□ 2.48
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms