Protein–RNA interactions for Protein: Q9Z0S2

Lhx2, LIM/homeobox protein Lhx2, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx2Q9Z0S2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Lhx2Q9Z0S2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.46■■□□□ 1.03
Lhx2Q9Z0S2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lhx2Q9Z0S2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.45■■□□□ 1.02
Lhx2Q9Z0S2 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lhx2Q9Z0S2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lhx2Q9Z0S2 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.44■■□□□ 1.02
Lhx2Q9Z0S2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.44■■□□□ 1.02
Lhx2Q9Z0S2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lhx2Q9Z0S2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lhx2Q9Z0S2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Lhx2Q9Z0S2 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lhx2Q9Z0S2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
Lhx2Q9Z0S2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Lhx2Q9Z0S2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Lhx2Q9Z0S2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Lhx2Q9Z0S2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.42■■□□□ 1.02
Lhx2Q9Z0S2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.42■■□□□ 1.02
Lhx2Q9Z0S2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Lhx2Q9Z0S2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lhx2Q9Z0S2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lhx2Q9Z0S2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lhx2Q9Z0S2 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.41■■□□□ 1.02
Lhx2Q9Z0S2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lhx2Q9Z0S2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Lhx2Q9Z0S2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Lhx2Q9Z0S2 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lhx2Q9Z0S2 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lhx2Q9Z0S2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lhx2Q9Z0S2 Gm7432-201ENSMUST00000210343 879 ntBASIC21.37■■□□□ 1.01
Lhx2Q9Z0S2 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
Lhx2Q9Z0S2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Lhx2Q9Z0S2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
Lhx2Q9Z0S2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lhx2Q9Z0S2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Lhx2Q9Z0S2 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.34■■□□□ 1.01
Lhx2Q9Z0S2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Lhx2Q9Z0S2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Lhx2Q9Z0S2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Lhx2Q9Z0S2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lhx2Q9Z0S2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lhx2Q9Z0S2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.31■■□□□ 1
Lhx2Q9Z0S2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
Lhx2Q9Z0S2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.31■■□□□ 1
Lhx2Q9Z0S2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Lhx2Q9Z0S2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lhx2Q9Z0S2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.31■■□□□ 1
Lhx2Q9Z0S2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Lhx2Q9Z0S2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lhx2Q9Z0S2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lhx2Q9Z0S2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.3■■□□□ 1
Lhx2Q9Z0S2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lhx2Q9Z0S2 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lhx2Q9Z0S2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.28■■□□□ 1
Lhx2Q9Z0S2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.28■■□□□ 1
Lhx2Q9Z0S2 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lhx2Q9Z0S2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.27■■□□□ 1
Lhx2Q9Z0S2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Lhx2Q9Z0S2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.26■□□□□ 0.99
Lhx2Q9Z0S2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Lhx2Q9Z0S2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lhx2Q9Z0S2 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lhx2Q9Z0S2 Gm11599-201ENSMUST00000118720 878 ntBASIC21.25■□□□□ 0.99
Lhx2Q9Z0S2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.25■□□□□ 0.99
Lhx2Q9Z0S2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Lhx2Q9Z0S2 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lhx2Q9Z0S2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lhx2Q9Z0S2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lhx2Q9Z0S2 Amer2-203ENSMUST00000225247 2662 ntBASIC21.22■□□□□ 0.99
Lhx2Q9Z0S2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Lhx2Q9Z0S2 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.22■□□□□ 0.99
Lhx2Q9Z0S2 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Lhx2Q9Z0S2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Lhx2Q9Z0S2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Lhx2Q9Z0S2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Lhx2Q9Z0S2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.19■□□□□ 0.98
Lhx2Q9Z0S2 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lhx2Q9Z0S2 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lhx2Q9Z0S2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Lhx2Q9Z0S2 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Lhx2Q9Z0S2 Particl-201ENSMUST00000205370 1560 ntBASIC21.18■□□□□ 0.98
Lhx2Q9Z0S2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Lhx2Q9Z0S2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lhx2Q9Z0S2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lhx2Q9Z0S2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.17■□□□□ 0.98
Lhx2Q9Z0S2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Lhx2Q9Z0S2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.16■□□□□ 0.98
Lhx2Q9Z0S2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.16■□□□□ 0.98
Lhx2Q9Z0S2 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Lhx2Q9Z0S2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Lhx2Q9Z0S2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.15■□□□□ 0.98
Lhx2Q9Z0S2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lhx2Q9Z0S2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Lhx2Q9Z0S2 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.15■□□□□ 0.98
Lhx2Q9Z0S2 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Lhx2Q9Z0S2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Lhx2Q9Z0S2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lhx2Q9Z0S2 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lhx2Q9Z0S2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
Lhx2Q9Z0S2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms