Protein–RNA interactions for Protein: Q9QZR0

Rnf25, E3 ubiquitin-protein ligase RNF25, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf25Q9QZR0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
Rnf25Q9QZR0 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Rnf25Q9QZR0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Rnf25Q9QZR0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25.61■■□□□ 1.69
Rnf25Q9QZR0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Rnf25Q9QZR0 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Rnf25Q9QZR0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
Rnf25Q9QZR0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Rnf25Q9QZR0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
Rnf25Q9QZR0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Rnf25Q9QZR0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Rnf25Q9QZR0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC25.59■■□□□ 1.69
Rnf25Q9QZR0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.59■■□□□ 1.69
Rnf25Q9QZR0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Rnf25Q9QZR0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Rnf25Q9QZR0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC25.58■■□□□ 1.68
Rnf25Q9QZR0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.57■■□□□ 1.68
Rnf25Q9QZR0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Rnf25Q9QZR0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Rnf25Q9QZR0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC25.56■■□□□ 1.68
Rnf25Q9QZR0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Rnf25Q9QZR0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Rnf25Q9QZR0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Rnf25Q9QZR0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Rnf25Q9QZR0 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Rnf25Q9QZR0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.54■■□□□ 1.68
Rnf25Q9QZR0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
Rnf25Q9QZR0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Rnf25Q9QZR0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Rnf25Q9QZR0 Gm30023-201ENSMUST00000197970 889 ntBASIC25.53■■□□□ 1.68
Rnf25Q9QZR0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
Rnf25Q9QZR0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Rnf25Q9QZR0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Rnf25Q9QZR0 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
Rnf25Q9QZR0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
Rnf25Q9QZR0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.5■■□□□ 1.67
Rnf25Q9QZR0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.49■■□□□ 1.67
Rnf25Q9QZR0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Rnf25Q9QZR0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Rnf25Q9QZR0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Rnf25Q9QZR0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Rnf25Q9QZR0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Rnf25Q9QZR0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC25.47■■□□□ 1.67
Rnf25Q9QZR0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Rnf25Q9QZR0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
Rnf25Q9QZR0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Rnf25Q9QZR0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Rnf25Q9QZR0 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.46■■□□□ 1.67
Rnf25Q9QZR0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
Rnf25Q9QZR0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Rnf25Q9QZR0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.67
Rnf25Q9QZR0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC25.44■■□□□ 1.66
Rnf25Q9QZR0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC25.44■■□□□ 1.66
Rnf25Q9QZR0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
Rnf25Q9QZR0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
Rnf25Q9QZR0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Rnf25Q9QZR0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.43■■□□□ 1.66
Rnf25Q9QZR0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Rnf25Q9QZR0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Rnf25Q9QZR0 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Rnf25Q9QZR0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Rnf25Q9QZR0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC25.41■■□□□ 1.66
Rnf25Q9QZR0 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rnf25Q9QZR0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Rnf25Q9QZR0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Rnf25Q9QZR0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Rnf25Q9QZR0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Rnf25Q9QZR0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Rnf25Q9QZR0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
Rnf25Q9QZR0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Rnf25Q9QZR0 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Rnf25Q9QZR0 Nkain2-201ENSMUST00000092602 558 ntBASIC25.37■■□□□ 1.65
Rnf25Q9QZR0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Rnf25Q9QZR0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.36■■□□□ 1.65
Rnf25Q9QZR0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Rnf25Q9QZR0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC25.35■■□□□ 1.65
Rnf25Q9QZR0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Rnf25Q9QZR0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
Rnf25Q9QZR0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Rnf25Q9QZR0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
Rnf25Q9QZR0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC25.34■■□□□ 1.65
Rnf25Q9QZR0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Rnf25Q9QZR0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Rnf25Q9QZR0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Rnf25Q9QZR0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rnf25Q9QZR0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Rnf25Q9QZR0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Rnf25Q9QZR0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Rnf25Q9QZR0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
Rnf25Q9QZR0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Rnf25Q9QZR0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Rnf25Q9QZR0 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rnf25Q9QZR0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC25.28■■□□□ 1.64
Rnf25Q9QZR0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC25.28■■□□□ 1.64
Rnf25Q9QZR0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
Rnf25Q9QZR0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Rnf25Q9QZR0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Rnf25Q9QZR0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC25.26■■□□□ 1.63
Rnf25Q9QZR0 Gm9939-201ENSMUST00000067161 1154 ntBASIC25.26■■□□□ 1.63
Rnf25Q9QZR0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 9.9 ms