Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Crlf1Q9JM58 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Crlf1Q9JM58 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Crlf1Q9JM58 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Crlf1Q9JM58 Gm4799-201ENSMUST00000095396 657 ntBASIC19.69■□□□□ 0.74
Crlf1Q9JM58 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Crlf1Q9JM58 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Crlf1Q9JM58 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Crlf1Q9JM58 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Crlf1Q9JM58 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.68■□□□□ 0.74
Crlf1Q9JM58 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Crlf1Q9JM58 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Crlf1Q9JM58 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Crlf1Q9JM58 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Crlf1Q9JM58 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Crlf1Q9JM58 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Crlf1Q9JM58 Gm7332-201ENSMUST00000118351 454 ntBASIC19.65■□□□□ 0.74
Crlf1Q9JM58 Gm16437-201ENSMUST00000025669 507 ntBASIC19.65■□□□□ 0.74
Crlf1Q9JM58 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Crlf1Q9JM58 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Crlf1Q9JM58 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Crlf1Q9JM58 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Crlf1Q9JM58 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.64■□□□□ 0.73
Crlf1Q9JM58 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Crlf1Q9JM58 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Crlf1Q9JM58 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Crlf1Q9JM58 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Crlf1Q9JM58 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.62■□□□□ 0.73
Crlf1Q9JM58 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.61■□□□□ 0.73
Crlf1Q9JM58 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.61■□□□□ 0.73
Crlf1Q9JM58 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Crlf1Q9JM58 Gm22567-201ENSMUST00000175542 342 ntBASIC19.6■□□□□ 0.73
Crlf1Q9JM58 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.6■□□□□ 0.73
Crlf1Q9JM58 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Crlf1Q9JM58 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Crlf1Q9JM58 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Crlf1Q9JM58 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Crlf1Q9JM58 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Crlf1Q9JM58 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.58■□□□□ 0.72
Crlf1Q9JM58 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Crlf1Q9JM58 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.57■□□□□ 0.72
Crlf1Q9JM58 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Crlf1Q9JM58 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Crlf1Q9JM58 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Crlf1Q9JM58 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Crlf1Q9JM58 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Crlf1Q9JM58 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.56■□□□□ 0.72
Crlf1Q9JM58 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Crlf1Q9JM58 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Crlf1Q9JM58 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.55■□□□□ 0.72
Crlf1Q9JM58 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Crlf1Q9JM58 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Crlf1Q9JM58 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.54■□□□□ 0.72
Crlf1Q9JM58 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Crlf1Q9JM58 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Crlf1Q9JM58 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Crlf1Q9JM58 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Crlf1Q9JM58 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Crlf1Q9JM58 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
Crlf1Q9JM58 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Crlf1Q9JM58 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Crlf1Q9JM58 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Crlf1Q9JM58 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Crlf1Q9JM58 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Crlf1Q9JM58 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Crlf1Q9JM58 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.5■□□□□ 0.71
Crlf1Q9JM58 Gm27502-201ENSMUST00000183495 199 ntBASIC19.5■□□□□ 0.71
Crlf1Q9JM58 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Crlf1Q9JM58 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Crlf1Q9JM58 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Crlf1Q9JM58 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Crlf1Q9JM58 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Crlf1Q9JM58 Gm30023-201ENSMUST00000197970 889 ntBASIC19.48■□□□□ 0.71
Crlf1Q9JM58 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.48■□□□□ 0.71
Crlf1Q9JM58 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Crlf1Q9JM58 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Crlf1Q9JM58 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.46■□□□□ 0.71
Crlf1Q9JM58 Gm5812-201ENSMUST00000061073 957 ntBASIC19.45■□□□□ 0.7
Crlf1Q9JM58 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Crlf1Q9JM58 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.44■□□□□ 0.7
Crlf1Q9JM58 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.44■□□□□ 0.7
Crlf1Q9JM58 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Crlf1Q9JM58 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Crlf1Q9JM58 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Crlf1Q9JM58 Mir3960-201ENSMUST00000198213 73 ntBASIC19.43■□□□□ 0.7
Crlf1Q9JM58 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Crlf1Q9JM58 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Crlf1Q9JM58 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Crlf1Q9JM58 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Crlf1Q9JM58 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Crlf1Q9JM58 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Crlf1Q9JM58 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Crlf1Q9JM58 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Crlf1Q9JM58 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Crlf1Q9JM58 Gm14523-201ENSMUST00000117260 558 ntBASIC19.39■□□□□ 0.69
Crlf1Q9JM58 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Crlf1Q9JM58 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Crlf1Q9JM58 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Crlf1Q9JM58 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Crlf1Q9JM58 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms