Protein–RNA interactions for Protein: Q9JJT0

Rcl1, RNA 3'-terminal phosphate cyclase-like protein, mousemouse

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcl1Q9JJT0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rcl1Q9JJT0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Rcl1Q9JJT0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rcl1Q9JJT0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.9■□□□□ 0.78
Rcl1Q9JJT0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rcl1Q9JJT0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Rcl1Q9JJT0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.89■□□□□ 0.77
Rcl1Q9JJT0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rcl1Q9JJT0 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rcl1Q9JJT0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rcl1Q9JJT0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rcl1Q9JJT0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rcl1Q9JJT0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rcl1Q9JJT0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rcl1Q9JJT0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rcl1Q9JJT0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rcl1Q9JJT0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rcl1Q9JJT0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rcl1Q9JJT0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.87■□□□□ 0.77
Rcl1Q9JJT0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.87■□□□□ 0.77
Rcl1Q9JJT0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rcl1Q9JJT0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rcl1Q9JJT0 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rcl1Q9JJT0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rcl1Q9JJT0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rcl1Q9JJT0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rcl1Q9JJT0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rcl1Q9JJT0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rcl1Q9JJT0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Rcl1Q9JJT0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rcl1Q9JJT0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rcl1Q9JJT0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.83■□□□□ 0.77
Rcl1Q9JJT0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rcl1Q9JJT0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rcl1Q9JJT0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rcl1Q9JJT0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Rcl1Q9JJT0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rcl1Q9JJT0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rcl1Q9JJT0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rcl1Q9JJT0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rcl1Q9JJT0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rcl1Q9JJT0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.79■□□□□ 0.76
Rcl1Q9JJT0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rcl1Q9JJT0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rcl1Q9JJT0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rcl1Q9JJT0 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.79■□□□□ 0.76
Rcl1Q9JJT0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rcl1Q9JJT0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rcl1Q9JJT0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rcl1Q9JJT0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rcl1Q9JJT0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rcl1Q9JJT0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rcl1Q9JJT0 Gm24970-201ENSMUST00000175582 82 ntBASIC19.77■□□□□ 0.76
Rcl1Q9JJT0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.77■□□□□ 0.76
Rcl1Q9JJT0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.77■□□□□ 0.76
Rcl1Q9JJT0 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rcl1Q9JJT0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rcl1Q9JJT0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rcl1Q9JJT0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rcl1Q9JJT0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.76■□□□□ 0.75
Rcl1Q9JJT0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rcl1Q9JJT0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Rcl1Q9JJT0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rcl1Q9JJT0 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rcl1Q9JJT0 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rcl1Q9JJT0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rcl1Q9JJT0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Rcl1Q9JJT0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rcl1Q9JJT0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rcl1Q9JJT0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rcl1Q9JJT0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rcl1Q9JJT0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Rcl1Q9JJT0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rcl1Q9JJT0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rcl1Q9JJT0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rcl1Q9JJT0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.72■□□□□ 0.75
Rcl1Q9JJT0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rcl1Q9JJT0 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rcl1Q9JJT0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rcl1Q9JJT0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rcl1Q9JJT0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rcl1Q9JJT0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rcl1Q9JJT0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rcl1Q9JJT0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rcl1Q9JJT0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rcl1Q9JJT0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Rcl1Q9JJT0 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.68■□□□□ 0.74
Rcl1Q9JJT0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.68■□□□□ 0.74
Rcl1Q9JJT0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rcl1Q9JJT0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.68■□□□□ 0.74
Rcl1Q9JJT0 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rcl1Q9JJT0 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rcl1Q9JJT0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rcl1Q9JJT0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Rcl1Q9JJT0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rcl1Q9JJT0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rcl1Q9JJT0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.66■□□□□ 0.74
Rcl1Q9JJT0 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Rcl1Q9JJT0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rcl1Q9JJT0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms