Protein–RNA interactions for Protein: Q9ER62

Tnfrsf22, Tumor necrosis factor receptor superfamily member 22, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf22Q9ER62 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Tnfrsf22Q9ER62 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Tnfrsf22Q9ER62 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Tnfrsf22Q9ER62 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Tnfrsf22Q9ER62 Gm30023-201ENSMUST00000197970 889 ntBASIC22.53■■□□□ 1.2
Tnfrsf22Q9ER62 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Tnfrsf22Q9ER62 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Tnfrsf22Q9ER62 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.52■■□□□ 1.2
Tnfrsf22Q9ER62 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Tnfrsf22Q9ER62 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.5■■□□□ 1.19
Tnfrsf22Q9ER62 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC22.49■■□□□ 1.19
Tnfrsf22Q9ER62 Gm7432-201ENSMUST00000210343 879 ntBASIC22.49■■□□□ 1.19
Tnfrsf22Q9ER62 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.48■■□□□ 1.19
Tnfrsf22Q9ER62 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Tnfrsf22Q9ER62 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.47■■□□□ 1.19
Tnfrsf22Q9ER62 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Tnfrsf22Q9ER62 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.46■■□□□ 1.19
Tnfrsf22Q9ER62 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.46■■□□□ 1.19
Tnfrsf22Q9ER62 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Tnfrsf22Q9ER62 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
Tnfrsf22Q9ER62 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Tnfrsf22Q9ER62 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Tnfrsf22Q9ER62 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.45■■□□□ 1.18
Tnfrsf22Q9ER62 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Tnfrsf22Q9ER62 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Tnfrsf22Q9ER62 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Tnfrsf22Q9ER62 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.42■■□□□ 1.18
Tnfrsf22Q9ER62 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tnfrsf22Q9ER62 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.42■■□□□ 1.18
Tnfrsf22Q9ER62 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Tnfrsf22Q9ER62 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.41■■□□□ 1.18
Tnfrsf22Q9ER62 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Tnfrsf22Q9ER62 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
Tnfrsf22Q9ER62 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.39■■□□□ 1.17
Tnfrsf22Q9ER62 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Tnfrsf22Q9ER62 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Tnfrsf22Q9ER62 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Tnfrsf22Q9ER62 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Tnfrsf22Q9ER62 Gm11599-201ENSMUST00000118720 878 ntBASIC22.37■■□□□ 1.17
Tnfrsf22Q9ER62 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.37■■□□□ 1.17
Tnfrsf22Q9ER62 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Tnfrsf22Q9ER62 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.36■■□□□ 1.17
Tnfrsf22Q9ER62 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.36■■□□□ 1.17
Tnfrsf22Q9ER62 Amer2-203ENSMUST00000225247 2662 ntBASIC22.35■■□□□ 1.17
Tnfrsf22Q9ER62 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Tnfrsf22Q9ER62 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Tnfrsf22Q9ER62 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Tnfrsf22Q9ER62 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tnfrsf22Q9ER62 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Tnfrsf22Q9ER62 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tnfrsf22Q9ER62 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Tnfrsf22Q9ER62 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Tnfrsf22Q9ER62 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Tnfrsf22Q9ER62 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.17
Tnfrsf22Q9ER62 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.33■■□□□ 1.16
Tnfrsf22Q9ER62 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.32■■□□□ 1.16
Tnfrsf22Q9ER62 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.32■■□□□ 1.16
Tnfrsf22Q9ER62 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tnfrsf22Q9ER62 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tnfrsf22Q9ER62 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tnfrsf22Q9ER62 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.31■■□□□ 1.16
Tnfrsf22Q9ER62 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Tnfrsf22Q9ER62 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.3■■□□□ 1.16
Tnfrsf22Q9ER62 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Tnfrsf22Q9ER62 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Tnfrsf22Q9ER62 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Tnfrsf22Q9ER62 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Tnfrsf22Q9ER62 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Tnfrsf22Q9ER62 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Tnfrsf22Q9ER62 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Tnfrsf22Q9ER62 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Tnfrsf22Q9ER62 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Tnfrsf22Q9ER62 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Tnfrsf22Q9ER62 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Tnfrsf22Q9ER62 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Tnfrsf22Q9ER62 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Tnfrsf22Q9ER62 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Tnfrsf22Q9ER62 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Tnfrsf22Q9ER62 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Tnfrsf22Q9ER62 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Tnfrsf22Q9ER62 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Tnfrsf22Q9ER62 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Tnfrsf22Q9ER62 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Tnfrsf22Q9ER62 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Tnfrsf22Q9ER62 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Tnfrsf22Q9ER62 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.22■■□□□ 1.15
Tnfrsf22Q9ER62 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Tnfrsf22Q9ER62 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Tnfrsf22Q9ER62 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Tnfrsf22Q9ER62 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Tnfrsf22Q9ER62 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Tnfrsf22Q9ER62 Particl-201ENSMUST00000205370 1560 ntBASIC22.2■■□□□ 1.14
Tnfrsf22Q9ER62 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Tnfrsf22Q9ER62 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Tnfrsf22Q9ER62 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Tnfrsf22Q9ER62 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Tnfrsf22Q9ER62 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.17■■□□□ 1.14
Tnfrsf22Q9ER62 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.17■■□□□ 1.14
Tnfrsf22Q9ER62 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Tnfrsf22Q9ER62 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.15■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 112 ms