Protein–RNA interactions for Protein: Q9EPS9

Vmn1r56, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r56Q9EPS9 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.29■■□□□ 1
Vmn1r56Q9EPS9 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vmn1r56Q9EPS9 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vmn1r56Q9EPS9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vmn1r56Q9EPS9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.27■■□□□ 1
Vmn1r56Q9EPS9 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vmn1r56Q9EPS9 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.27■■□□□ 1
Vmn1r56Q9EPS9 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Vmn1r56Q9EPS9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Vmn1r56Q9EPS9 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.26■□□□□ 0.99
Vmn1r56Q9EPS9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vmn1r56Q9EPS9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.25■□□□□ 0.99
Vmn1r56Q9EPS9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Vmn1r56Q9EPS9 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vmn1r56Q9EPS9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.25■□□□□ 0.99
Vmn1r56Q9EPS9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vmn1r56Q9EPS9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vmn1r56Q9EPS9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vmn1r56Q9EPS9 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.24■□□□□ 0.99
Vmn1r56Q9EPS9 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vmn1r56Q9EPS9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Vmn1r56Q9EPS9 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Vmn1r56Q9EPS9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vmn1r56Q9EPS9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vmn1r56Q9EPS9 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.22■□□□□ 0.99
Vmn1r56Q9EPS9 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.21■□□□□ 0.99
Vmn1r56Q9EPS9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Vmn1r56Q9EPS9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Vmn1r56Q9EPS9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Vmn1r56Q9EPS9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.18■□□□□ 0.98
Vmn1r56Q9EPS9 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vmn1r56Q9EPS9 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vmn1r56Q9EPS9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vmn1r56Q9EPS9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Vmn1r56Q9EPS9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vmn1r56Q9EPS9 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vmn1r56Q9EPS9 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vmn1r56Q9EPS9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vmn1r56Q9EPS9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Vmn1r56Q9EPS9 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.15■□□□□ 0.98
Vmn1r56Q9EPS9 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Vmn1r56Q9EPS9 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.14■□□□□ 0.97
Vmn1r56Q9EPS9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Vmn1r56Q9EPS9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vmn1r56Q9EPS9 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.13■□□□□ 0.97
Vmn1r56Q9EPS9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Vmn1r56Q9EPS9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vmn1r56Q9EPS9 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vmn1r56Q9EPS9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Vmn1r56Q9EPS9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.11■□□□□ 0.97
Vmn1r56Q9EPS9 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vmn1r56Q9EPS9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.1■□□□□ 0.97
Vmn1r56Q9EPS9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Vmn1r56Q9EPS9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Vmn1r56Q9EPS9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vmn1r56Q9EPS9 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vmn1r56Q9EPS9 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vmn1r56Q9EPS9 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Vmn1r56Q9EPS9 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Vmn1r56Q9EPS9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Vmn1r56Q9EPS9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Vmn1r56Q9EPS9 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vmn1r56Q9EPS9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Vmn1r56Q9EPS9 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Vmn1r56Q9EPS9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vmn1r56Q9EPS9 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Vmn1r56Q9EPS9 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Vmn1r56Q9EPS9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Vmn1r56Q9EPS9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.04■□□□□ 0.96
Vmn1r56Q9EPS9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vmn1r56Q9EPS9 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vmn1r56Q9EPS9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vmn1r56Q9EPS9 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vmn1r56Q9EPS9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Vmn1r56Q9EPS9 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Vmn1r56Q9EPS9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vmn1r56Q9EPS9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vmn1r56Q9EPS9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Vmn1r56Q9EPS9 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Vmn1r56Q9EPS9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.02■□□□□ 0.96
Vmn1r56Q9EPS9 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.95
Vmn1r56Q9EPS9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
Vmn1r56Q9EPS9 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.01■□□□□ 0.95
Vmn1r56Q9EPS9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vmn1r56Q9EPS9 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Vmn1r56Q9EPS9 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21■□□□□ 0.95
Vmn1r56Q9EPS9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vmn1r56Q9EPS9 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Vmn1r56Q9EPS9 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.99■□□□□ 0.95
Vmn1r56Q9EPS9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vmn1r56Q9EPS9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Vmn1r56Q9EPS9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vmn1r56Q9EPS9 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Vmn1r56Q9EPS9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Vmn1r56Q9EPS9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vmn1r56Q9EPS9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vmn1r56Q9EPS9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Vmn1r56Q9EPS9 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Vmn1r56Q9EPS9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vmn1r56Q9EPS9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 107.9 ms